Harpegnathos saltator (Jerdon's jumping ant): 105190796
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Entry
105190796 CDS
T03918
Name
(RefSeq) protein CASC3 isoform X2
KO
K14323
protein CASC3
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03013
Nucleocytoplasmic transport
hst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105190796
03015 mRNA surveillance pathway
105190796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105190796
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105190796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
105190796
NCBI-ProteinID:
XP_011152031
UniProt:
E2C7F7
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MSDTRRRRKSNQSSDDLSDSYEELNVTKETQSSEQTDGHQDSECDIYESDTDAESQDGGE
QRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEITDNNPETQTNVKET
KEKKVWKDKGDRWDHDRYNDEEQAPKKPEELIATYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKTGNTPSRGTNRRFHKNNEDFPSLGSSKNTPTKVEEPVISSAWYSSKN
KIQNKTQNFPPLQSQQDNIKSKPATVSNTSTSESKAPNGSTNAAWKKDGKHSVQNQSANG
NAGSGGDAEKLANNKASPRESVNKRNTQESVSLTASRTRGRGFKSNANNNMVTNRIVENK
SKGRGSAPVAVENRRNNTAQLNDEHQLVHDMKQLNVSDGTQYHQTARHSKGFFASSNQHR
SNAVPPRMQQQQSHQQQTHSQQQTIQQQQDGSGNRPKRYSSQRQRTTISETSSQQNYPSQ
HGQHGYFSPQGYPQGHFEQSSAVAPATTAIAGQPVISLPPSGQPAGYAPPAFLVPPPQFI
PPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPPVQPQGPPPPQELFQPQGCTYYSPAQQ
QQQQAQTAPIRRPKAAIPILPPPDNQQSGRGRGRSTQQYQQSNQLGNMQQPEQQEVKINA
VAGSDEKSVPGQFDSVQVEQSSTPKDQESQKIQASSDTVRTVNIDESVDRNTNVDTHIML
DASSIKKDNVNDSVSVKELLETTCIEKDTVLPNQATLAITAITTTAAATATTITTTATET
EHELNNIESAITENTIVEKAAA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacgcgacgacgtcgaaaatccaatcaatcgtccgatgatctctcggattca
tatgaagaattgaatgtgacaaaggagactcagagcagtgagcaaaccgatggacaccaa
gattcagaatgtgatatttatgaaagtgatactgatgctgaatcacaagatggaggagaa
caacgagaaagtggtgatggtcaagaggaagagaagccacagaaaaagttggacgatgat
gaagacagacgtaacccacaatatattccaaaacgtgggacattttatgaacatgatgat
cgtacaactgatgaaataactgacaataaccctgagactcagacaaatgtgaaagaaact
aaagagaaaaaagtgtggaaagataaaggagatagatgggaccatgatcggtataacgat
gaagaacaagctccaaaaaagcctgaagagttaatagcaacatatggttatgatataaga
aatgaagaggggccacctagagctagaaggagaagaagatatggccgtgggcctaacaag
tatacaaggaactgggaagatgaagatgcatatgggaaaacaggcaatactcccagtaga
ggaactaacagacgtttccataaaaataatgaggatttccctagtcttggttctagtaaa
aatactccaacaaaagtagaagaacctgtaatttcttctgcttggtacagtagtaagaat
aaaatacaaaacaagacgcaaaattttccacctcttcaatcgcaacaagataatatcaaa
tccaagcctgctactgtctccaatacatccacaagcgaaagcaaagcaccaaatggatcc
actaatgcagcatggaagaaagatggtaaacattcggttcaaaatcagagtgcaaatgga
aatgccggatccggtggtgatgcggaaaaattggctaataacaaagcgtcaccaagagaa
agtgtcaacaagagaaatacccaagaatctgtgagcttgactgcaagtagaacacgtggt
agaggtttcaagtccaatgccaataacaatatggtcactaacagaatagttgagaataaa
tcgaaaggccgtggttctgctccagttgctgttgagaatagaaggaacaatactgcgcag
ctcaacgatgagcatcagcttgttcatgatatgaaacagctcaatgttagcgatggtact
cagtatcaccagaccgcaagacacagcaaaggtttcttcgcgtcctccaaccaacacaga
tcaaacgcggtaccacctagaatgcaacagcaacaatcacaccagcaacaaacgcactcg
caacaacagaccatacagcaacaacaagacggctctggaaacagacctaaacgttactct
agtcagcgtcagcggactaccatttcagaaacttcgagccaacagaattatccatcccaa
cacggacaacacggatatttctcacctcaaggctatccacaagggcattttgagcaatct
tccgcagttgctccagctacaacagccatagcggggcaacctgttatttctctaccgccc
agcggacaacctgctggttacgcaccaccagcgttcttagtgccgccacctcaatttatc
ccacctcaaaccgcacctcctagtataattaattatgtacccggtccaaatggcccaaca
ttcccaccaaattttcaaggttaccaaggatataatcctccggtacagcctcaaggacca
ccaccgcctcaagaattgtttcaaccgcaaggatgtacttactatagtccagcgcagcaa
caacagcagcaagcacagacagcccctatacgacgaccgaaagcggcgatacctattctt
ccaccgcctgataatcagcaaagtggcagaggaagaggtagaagcactcagcagtatcaa
caaagtaaccaactcggtaatatgcaacagcctgagcaacaagaagtcaagattaatgca
gtggctggaagtgacgagaaatctgtgccgggacaattcgacagtgtgcaagtcgagcaa
tcgagcacgccgaaagatcaagaatcccaaaagattcaagcttcctcagatacagttaga
acagtgaatatcgacgaaagcgtagacagaaataccaatgtcgatactcacataatgctt
gacgcatcatccattaagaaggataacgtaaatgacagtgtcagtgtgaaagaattactg
gaaacaacatgcattgaaaaagatacggttttgcccaaccaagcgacattggctatcacc
gccatcactaccaccgccgccgctaccgctactacgatcactaccaccgccacagagact
gaacacgaattaaataacattgaatccgcgattaccgaaaatactattgtcgaaaaagcg
gcagcctaa
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