KEGG   Harpegnathos saltator (Jerdon's jumping ant): 105191549
Entry
105191549         CDS       T03918                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
hst  Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105191549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hst03041]
    105191549
Spliceosome [BR:hst03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105191549
 Complex C
   U5 SnRNP specific factors
    105191549
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 NBCH_WD40 eIF2A Beta-prop_SPT8 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 105191549
NCBI-ProteinID: XP_011153332
UniProt: E2CA00
LinkDB
Position
Unknown
AA seq 349 aa
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMAMIMLLEGHQGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENIAVMSGHSGAVMELHFSPDGNHLYTAST
DMTLGLWDIVAGTRIKKLKGHTLFVNSVSGARRGPTLLCSGSDDSTIRVWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAVLYKLKGHTDTITGLSLSPDGSY
VLSNAMDNTLKIWDVRPFAPFERCVKILSGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIET
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgccaatcttggataagagaaaaggagatgatattttagcgctagttccagcttcaaaa
aggacgaaaaatgaggtcgtattcagtagcagagaaaaggcagttgtgcaaagtggtcca
ccacgaacatcctccttaatggcaatgataatgttgctcgaaggacatcaaggagatata
ttttcccttgaatttcatccagaaggacaatatcttgcatcaacaggattcgatcgacag
atctttatttggaatgtttacggagaatgtgaaaacattgctgttatgtctggacacagt
ggagctgtgatggagttacactttagtccggatggtaatcatctttatacagctagcaca
gatatgactctaggtttatgggatatagtagctggaacacgtatcaagaagttgaaaggc
catactctgtttgtgaattctgtgtctggtgcacgaagaggaccgacattgctttgttca
ggtagtgatgacagcacaattcgtgtctgggatccaagaaaacgtggtcaatgttacaca
ctaaataatacatatcaggtgactgcagtgacattcaatgatacagcagaacaagttatt
agtggtggtattgataatgatataaaggtatgggatctaagaaaaaatgcagtgctttac
aaattgaagggacatactgacactattactggattgagtctcagtccagatggttcatat
gtgctttctaatgctatggataatacattgaaaatatgggatgtgaggccgtttgcaccc
tttgagcgttgcgtgaaaatattatccggacaccaacacaattttgaaaagaatcttctg
agatgtgcatggtcaccagatggtagtaaagtatcggcgggatcgtcagatcgattccat
tatatctgggataccacgagtcgtaggatcttgtacaaattgccgggacataatggatct
gtgaatgacatcgatttccatccgaaggaacctatagtgtgttctggatcaagcgataaa
cagatctatctaggtgaaattgaaacatga

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