Halanaeroarchaeum sulfurireducens HSR2: HLASF_0474
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Entry
HLASF_0474 CDS
T03927
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03030
DNA replication
hsu03420
Nucleotide excision repair
hsu03430
Mismatch repair
hsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLASF_0474
03420 Nucleotide excision repair
HLASF_0474
03430 Mismatch repair
HLASF_0474
03440 Homologous recombination
HLASF_0474
03460 Fanconi anemia pathway
HLASF_0474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsu03000
]
HLASF_0474
03032 DNA replication proteins [BR:
hsu03032
]
HLASF_0474
03400 DNA repair and recombination proteins [BR:
hsu03400
]
HLASF_0474
Transcription factors [BR:
hsu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HLASF_0474
DNA replication proteins [BR:
hsu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HLASF_0474
DNA repair and recombination proteins [BR:
hsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HLASF_0474
MMR (mismatch excision repair)
HLASF_0474
DSBR (double strand breaks repair)
HR (homologous recombination)
HLASF_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SHLD2_OB1
HROB
tRNA_anti_2
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
AKH96976
UniProt:
A0A0F7P6Z7
LinkDB
All DBs
Position
complement(456404..457837)
Genome browser
AA seq
477 aa
AA seq
DB search
MGDIEEIYEDLDTDVSLEEFREAVESKVEQMGGLADEETAAMLVAHELDEGEVEGVADVE
AGMEEAKFVAKVTGVGELRTFDRDGDGDEPDEGQVVNVEVADETGQIRATFWDEQAQAAI
DELEEGDVLRIKGRPQSGYNGVEVSVSQVEVDEDVEVDVAVQDEYNVGDLSLGISDVTLV
AEVLGSDPIRTFDRDDGSEGQVANLLVGDDTGRVRVTLWDERAALAEEFDQHDIVEIVDG
YVREREGSLELHVGDHGDVNPADEDVRFDPDATPIENLEIDETADIAGVVRSADPKRTFE
REDGSEGQVRNVRLQDDTDDIRVALWGEKADRDLGPGDEVLFVDVQIQDGWQDDIEASAD
WRSTVIPLEDGATTEDAESETGGLDAFTPTDGGADASAEGTGNKDDGDGPETDPSTVGAD
GEDVAFTGVVVQAGDPIILDDGERTVTVTSSADVELGEEVTVTGTLDDGHIEGATFE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatcgaggaaatctacgaggacctcgacaccgacgtctccctcgaggagttc
cgggaggccgtcgagtcgaaagtcgagcagatgggcggactggccgacgaggagaccgct
gcgatgctcgtcgcccacgaactggacgagggcgaggtcgagggcgtcgccgacgtcgag
gcgggaatggaggaagcgaaattcgtcgcgaaggtgaccggcgtcggggaactgcgcacc
ttcgatcgggatggcgacggcgacgagccggacgaggggcaggtcgtcaacgtcgaagtg
gcggacgagacgggccagattcgggcgacgttctgggacgagcaggcacaggccgccatc
gacgaactcgaggagggggacgtccttcggatcaaaggccgcccgcagtcggggtacaac
ggggtggaggtgagcgtctcgcaggtcgaagtcgacgaggacgtcgaggtcgatgtggcg
gtacaggacgaatacaacgtcggagacctttccctggggatctccgacgtgaccctggtc
gccgaagtgctgggcagcgatccgatccggaccttcgaccgggacgacgggtcggagggg
caggtcgcaaatctgctggtcggtgacgacaccgggcgagtccgagttaccctctgggac
gagcgggcggcgctcgccgaggagttcgatcaacacgacatcgtcgaaatcgtcgacggc
tacgtgcgcgagcgagaggggtccctcgaattgcacgtcggcgaccacggcgacgtcaac
cccgcggacgaggacgttcgattcgaccccgacgccacgccgatcgagaacctggagatc
gacgagacggccgacatcgcgggcgtcgtccgctcggcggatccgaagcggaccttcgag
cgcgaggacgggtccgaagggcaggtgcggaacgttcgcctccaggacgacacggacgac
attcgcgtcgcgttgtggggggagaaggccgaccgcgacctcggcccgggcgacgaagtc
ctcttcgtggacgtccagatccaggacggatggcaggacgacatcgaggcgtccgccgac
tggcgatcgactgtcatcccgctcgaggatggtgccacgaccgaggacgcggaatcggag
acgggcggactcgacgcgttcactccgacggacggcggagcggacgcgtcggccgaaggg
acgggaaacaaagacgacggcgacggaccggagaccgacccgtcgacggtcggtgccgac
ggcgaggacgtcgcgttcaccggcgtcgtcgtccaggccggcgacccgatcatcctcgac
gacggcgaacggaccgtgaccgtgacctcgtcggcggacgtggagctcggcgaggaggta
acggtcacgggaaccctcgacgatgggcacatcgagggggcgacgttcgagtga
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