Halanaeroarchaeum sulfurireducens HSR2: HLASF_0503
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Entry
HLASF_0503 CDS
T03927
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLASF_0503 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsu03021
]
HLASF_0503 (rpoA1)
Enzymes [BR:
hsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HLASF_0503 (rpoA1)
Transcription machinery [BR:
hsu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HLASF_0503 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Intein_splicing
LAGLIDADG_3
Motif
Other DBs
NCBI-ProteinID:
AKH97002
UniProt:
A0A0F7P8D3
LinkDB
All DBs
Position
482538..485201
Genome browser
AA seq
887 aa
AA seq
DB search
MTEITEAVEAIVEDTELPLRLREDVYETLEDREDLTLEQVEEIARAVESKYLDNRVPPLD
PVGTVSAQSIGEPGTQMSVPYDERVLVRRGGETEMREIGRLVDETLDVRETRTLDDHEVA
RAPNDLEVPSLREDEGVEWMQVEEVSRHDAPDELLSFTLKSGREITATRAHSFVTRRNNE
VVPVAGEELDVGDWLPIVSDLTVDDAPDHVDLRDHLPTGDYWFTSTLTDGGTASFPASDA
QVANKRVALDRGEIDGDTAYPVGGTVGLPEQFPLDEGTGFFIGAWLAEGSLADGYVSISN
VDPVFQERVRAFADRFDLSVNEYENESGFAMGYDIRINGTVLADFLSETCLVGDDKVVPG
FAFGAPEGFVRGLLAGYVGGDGNAGRNAIRTSSTSERLTEGIALLFARIGVYGTIGDQKG
SRTLRIPRKFVPRVDNRLDIPGERGVAIADLASSIDGGGPDTTDQVPNFGDALSEAASRA
GIPARQVNSATNRQRIGRSRLSRLVEEIDSVTDERSPEIDALERAVDSDVVWDRIESIEV
VEPDHEFVYDLSVAGLETFTTGRGIVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKT
PDTPMMTVHLEEEYANDREKAHEVVWQIEATKILALGDISTNVADMIVTVDLNEDTLQER
WPTLHDTNQIAEEIATAMEDALGVSVTQQGTVLEFGPEQPSYRELLQLVEELRDVVFKGI
EDISRVVIRKEQTDDGEEFVLYTEGSAFKKTLQIEGVDASRSTCNNIHEIHETLGIEAAR
ETIIEETKDTLEEQGLGDVNVRHLMLVADIMSNDGTIQSIGRHGISGNKESVLARAAFEV
TVNHLLDAAIYGEADDLDGVIENVIVGKAVKLGTGDVDLRMSASKSD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcaccgaggccgtggaggccatcgtcgaggacacggagctgccactacga
ctcagagaggacgtctacgagaccctcgaagatcgcgaggacctcacgctcgaacaggtc
gaggagatagccagagcggtcgagagcaagtacctcgacaaccgggtgccacctctcgat
ccggtcgggactgtctccgcccagtccatcggtgaaccgggaacgcagatgagcgttccc
tacgatgagcgtgtgctcgtccggcgagggggtgagaccgagatgcgcgagatcggtcga
ctcgtcgacgagacactcgacgtcagggagacgcgtactctcgacgaccacgaggtagct
cgcgccccgaacgacctggaggtcccgagcctccgcgaggatgagggcgtggagtggatg
caggtcgaggaagtcagcagacacgatgcaccggatgaactcctctcgttcacgctgaag
tcgggccgggagatcaccgcgacacgtgcacactcgttcgtgacgcgacgcaacaacgag
gtcgttcctgtcgcgggcgaagaacttgacgtcggggactggcttccgatcgtttccgat
cttactgtggatgacgctcccgaccacgtcgatcttcgcgatcacctcccgaccggagac
tactggttcacctccacgctcaccgacggcggcacggcgtcgttcccagcgagcgacgca
caggtggcgaacaaacgtgtagctctcgatcgtggcgagatcgacggggacacggcctat
cccgttggtggaaccgttggtctccccgaacaattcccgctcgacgaggggacgggcttt
ttcatcggtgcgtggctggcggaaggatctctggctgacggctacgtctcgatatcgaac
gtcgacccggtgttccaggagagggtccgtgcgttcgcagaccggttcgacctctcggtg
aacgagtacgagaacgaaagcggattcgcaatgggctacgacattcgtatcaacgggacc
gtcctcgcggacttcctgagtgagacctgtctcgtcggggacgacaaagtggtccccgga
ttcgcgttcggtgcgcctgaggggttcgttcggggcctccttgcgggatacgtgggcggt
gacgggaacgctggtcggaacgcgattcggacgagttcgacgagcgaacgactcacggag
gggatcgcactcctgttcgccaggattggcgtttacggaacgatcggcgatcaaaagggc
tcacggacgctccgtatcccgcgaaaattcgttccccgcgtcgataaccgtctcgatatt
cccggcgagcgtggtgtggccatcgcggatctcgcgtcgtcaatcgacgggggcggaccg
gacacgaccgatcaggtccccaacttcggcgatgcattgagcgaggcggcgtcccgggcg
gggattcccgctcggcaggtcaacagcgcgacgaaccggcagcgaatcggtcggagccgc
ctgtctcggctcgtcgaggagatcgattcggttaccgacgaacgctcgcccgaaatcgat
gcactcgaacgcgccgtcgacagcgatgtcgtctgggatcgcatcgagtctatcgaggtc
gtcgaacccgaccacgagttcgtctatgacctctccgtcgctgggttggagacgttcacg
acgggccggggaatcgtcacccacaacacgatgaacaccttccactacgctggcgtcgcg
gaaatcgacgtgacgcaggggctcccgcgactcatcgagctggtggacgcccggaagacg
cccgacaccccgatgatgacggttcatctggaggaggagtacgccaacgaccgcgagaag
gcccacgaagtggtctggcagatcgaggccacgaagatcctcgcactcggggacatctcg
acgaacgtcgctgacatgatcgtcaccgtcgacctgaacgaggacaccctccaggagcga
tggcccacgcttcacgacacgaaccagatcgccgaggagatcgcgacggccatggaggac
gccctcggcgtgtcggtcacccagcagggtaccgtcctcgagttcgggcccgaacagccc
agttatcgcgaactcctccagctcgtcgaggagttgcgcgacgtcgtgttcaagggcatc
gaggacatttcgcgggtcgtcattcggaaggagcaaaccgatgacggcgaggagttcgtc
ctctacaccgaggggtctgcgttcaagaagacgctccaaatcgagggcgtcgacgcctcc
cgctcgacctgtaacaacatccacgagatccacgaaaccctcggaatcgaggcggcccgc
gagacgataatcgaggagacgaaagacaccctcgaagagcagggcctcggcgacgtgaac
gtccgccatctgatgctggtcgccgacatcatgagcaacgacgggacgatccagtccatc
ggccgccacggcatctccgggaacaaggagagcgtcctggcgcgggcggccttcgaggtg
acggtgaatcacctcttagacgccgccatctacggcgaggccgacgacctcgatggggtc
atcgagaacgtcatcgtcggcaaagcggtgaagcttggaaccggtgacgtcgaccttcgc
atgtccgcgagcaagtcggactag
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