Halanaeroarchaeum sulfurireducens HSR2: HLASF_1450
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Entry
HLASF_1450 CDS
T03927
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLASF_1450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsu03019
]
HLASF_1450
Messenger RNA biogenesis [BR:
hsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HLASF_1450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKH97933
UniProt:
A0A0F7PF28
LinkDB
All DBs
Position
complement(1404618..1405964)
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AA seq
448 aa
AA seq
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MEIEIATIGGYEAVGRQMTAVRAGNDVVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRVMSELEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVATPYTIELVKGQLEGEQK
FGVDNDLVTMSGGESMEIGDGVELEFVHVTHSIIDAINPVLHTPEGAIVYGLDKRIDHDP
VLEDPFDMKRFREIGREGEGVLCYIEDTTNAVKKGRTPSESIARHHLRDTLKSMEDYTGG
IVATTFSSHISRVSSLVEFAKEIGRQPILLGRSMEHYSGAAERMGYVDFPDNLGMFGHRK
SVDRAFKRIMNEGKGNFLPIVTGHQGEPRAMLTRMGRGETPFELEDGDKVIFSARIIPEP
TNEGQRYQAEQLLQMQGARIYDEIHVSGHLSQEGHYQMLDALQPQNVIPAHQSMEGYAPY
VELAEGMGYDVGRDLHVTRNGNRIQLVE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaatcgcaacgataggcggatacgaagcggtcggacggcagatgactgcc
gtgcgagcaggaaacgacgtggtcatcttcgacatggggctcaacctctcgaaggttctg
atccacgacaacgttgagaccgagcgcatgcacagcctcgatctgatcgacatgggcgca
atcccggacgaccgggtgatgtccgaactcgagggcgacgtgaaggccatcgtgccgacc
cacggccacctcgatcacatcggcgccatctccaaactcgcccaccgctacgacgcaccg
atcgtcgcgacgccgtacaccatcgagctggtcaaaggccaactcgagggcgaacagaag
ttcggcgtcgacaacgatctggttacgatgtccggcggcgagtcgatggagatcggcgat
ggagtcgaactcgaattcgtccacgtcacacactccatcatcgacgccatcaaccccgtc
ctgcacacgcccgagggtgccatcgtctacgggctggacaaacgtatcgaccacgacccg
gtcctcgaggacccattcgatatgaagcggttccgcgagatcggccgcgagggggaaggc
gtgctctgttatatcgaggacacgacgaacgcggtcaagaaagggcggacgccgagtgaa
tcaatcgcgcgccaccacctccgtgatacgctcaagagtatggaggattacacgggcggc
atcgtcgcaacgactttctcctcgcacatctcccgggttagcagcctggtcgagttcgcc
aaggagatcggtcgccagcccattctcctcggccggtcgatggaacactactcgggtgct
gcagagcgcatgggctacgtggactttcccgacaatctcggtatgttcggccaccgaaag
agcgtcgaccgggcgttcaagcgtatcatgaacgaaggaaagggcaacttcctgccgatc
gtcaccggtcatcagggtgaaccgcgcgccatgctcacccggatgggccggggggagacg
cccttcgaactggaggacggcgacaaggtcatcttctcggcgcgcatcatcccggaaccg
acgaacgagggccagcgctaccaggccgaacaactgctccagatgcagggcgcgcgcatc
tacgacgagatccacgtctccggccacctcagccaggaaggccactaccagatgctggac
gcgctccagccccagaacgtcattcccgcacaccagagcatggaggggtacgcaccgtac
gtcgaactcgcagaaggtatgggctacgacgtcggccgtgacctgcacgtgacgcgcaac
ggcaacagaatacagctcgtcgagtga
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