KEGG   Halanaeroarchaeum sulfurireducens HSR2: HLASF_1450
Entry
HLASF_1450        CDS       T03927                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hsu  Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HLASF_1450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsu03019]
    HLASF_1450
Messenger RNA biogenesis [BR:hsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HLASF_1450
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AKH97933
UniProt: A0A0F7PF28
LinkDB
Position
complement(1404618..1405964)
AA seq 448 aa
MEIEIATIGGYEAVGRQMTAVRAGNDVVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRVMSELEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVATPYTIELVKGQLEGEQK
FGVDNDLVTMSGGESMEIGDGVELEFVHVTHSIIDAINPVLHTPEGAIVYGLDKRIDHDP
VLEDPFDMKRFREIGREGEGVLCYIEDTTNAVKKGRTPSESIARHHLRDTLKSMEDYTGG
IVATTFSSHISRVSSLVEFAKEIGRQPILLGRSMEHYSGAAERMGYVDFPDNLGMFGHRK
SVDRAFKRIMNEGKGNFLPIVTGHQGEPRAMLTRMGRGETPFELEDGDKVIFSARIIPEP
TNEGQRYQAEQLLQMQGARIYDEIHVSGHLSQEGHYQMLDALQPQNVIPAHQSMEGYAPY
VELAEGMGYDVGRDLHVTRNGNRIQLVE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaaatcgaaatcgcaacgataggcggatacgaagcggtcggacggcagatgactgcc
gtgcgagcaggaaacgacgtggtcatcttcgacatggggctcaacctctcgaaggttctg
atccacgacaacgttgagaccgagcgcatgcacagcctcgatctgatcgacatgggcgca
atcccggacgaccgggtgatgtccgaactcgagggcgacgtgaaggccatcgtgccgacc
cacggccacctcgatcacatcggcgccatctccaaactcgcccaccgctacgacgcaccg
atcgtcgcgacgccgtacaccatcgagctggtcaaaggccaactcgagggcgaacagaag
ttcggcgtcgacaacgatctggttacgatgtccggcggcgagtcgatggagatcggcgat
ggagtcgaactcgaattcgtccacgtcacacactccatcatcgacgccatcaaccccgtc
ctgcacacgcccgagggtgccatcgtctacgggctggacaaacgtatcgaccacgacccg
gtcctcgaggacccattcgatatgaagcggttccgcgagatcggccgcgagggggaaggc
gtgctctgttatatcgaggacacgacgaacgcggtcaagaaagggcggacgccgagtgaa
tcaatcgcgcgccaccacctccgtgatacgctcaagagtatggaggattacacgggcggc
atcgtcgcaacgactttctcctcgcacatctcccgggttagcagcctggtcgagttcgcc
aaggagatcggtcgccagcccattctcctcggccggtcgatggaacactactcgggtgct
gcagagcgcatgggctacgtggactttcccgacaatctcggtatgttcggccaccgaaag
agcgtcgaccgggcgttcaagcgtatcatgaacgaaggaaagggcaacttcctgccgatc
gtcaccggtcatcagggtgaaccgcgcgccatgctcacccggatgggccggggggagacg
cccttcgaactggaggacggcgacaaggtcatcttctcggcgcgcatcatcccggaaccg
acgaacgagggccagcgctaccaggccgaacaactgctccagatgcagggcgcgcgcatc
tacgacgagatccacgtctccggccacctcagccaggaaggccactaccagatgctggac
gcgctccagccccagaacgtcattcccgcacaccagagcatggaggggtacgcaccgtac
gtcgaactcgcagaaggtatgggctacgacgtcggccgtgacctgcacgtgacgcgcaac
ggcaacagaatacagctcgtcgagtga

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