| Entry |
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| Symbol |
lig
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| Name |
(GenBank) ATP-dependent DNA ligase
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| KO |
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| Organism |
hsu Halanaeroarchaeum sulfurireducens HSR2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hsu00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLASF_1504 (lig)
03410 Base excision repair
HLASF_1504 (lig)
03420 Nucleotide excision repair
HLASF_1504 (lig)
03430 Mismatch repair
HLASF_1504 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:hsu03032]
HLASF_1504 (lig)
03400 DNA repair and recombination proteins [BR:hsu03400]
HLASF_1504 (lig)
Enzymes [BR:hsu01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
HLASF_1504 (lig)
6.5.1.6 DNA ligase (ATP or NAD+)
HLASF_1504 (lig)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
HLASF_1504 (lig)
DNA replication proteins [BR:hsu03032]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HLASF_1504 (lig)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HLASF_1504 (lig)
DNA repair and recombination proteins [BR:hsu03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HLASF_1504 (lig)
NER (nucleotide excision repair)
Other NER factors
HLASF_1504 (lig)
MMR (mismatch excision repair)
Other MMR factors
HLASF_1504 (lig)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1456326..1457966)
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| AA seq |
546 aa
MEFSEFADRAAAVEAASADTEITHLVADLFEAADDDLSIVARYVQGRVLPGHDETTLNVG
PNNCYAAIARAAGQNVDADDVEATVADLGDVGDVAAAYDFGTQRGLSAFGTGDEESLTVG
GVHAELETLANASGPGSTDEKVTILFGLFNRCSSTEARYLARLVLSEMRIGVGAGTVRDA
IIEAFDVSAEAVERALQVSNDYGLVAETARDDPDRLDEISLEIGRPVQAMLAQAGTAGDA
LSAWGETVVETKYDGARVQIHVDDGVDIYSRNMEDVTDPLPDVVETVEEAIDVPAILDGE
VLAIDESGDPLPFQEVLRRFRRKHDIEQASAAVDLDLVVFDCLHADGDDLIDEPLCDRRD
RLERIWDGHLADFSLAAEPETIARLEDEALDAGHEGIMLKDPDSAYTPGRRGKNWLKRKP
DVETLDLVVTGAEWGEGRRASFLGSYELSVHTPNGFETVGKVATGITDEELKRLSALVEP
KIRSEDGRTVDVEPSVVFEVGYEEIQHSPTYSSGYALRFPRFIGVREDLNAEDADTLDRV
ERLVDA |
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| NT seq |
1641 nt +upstreamnt +downstreamnt
atggagttcagcgaattcgccgaccgagcggccgccgtcgaggccgcctctgccgacacc
gagatcacccatctggtggccgacctgttcgaggcggccgacgacgacctctccatcgtc
gccaggtacgttcagggtcgcgtgttaccgggacacgacgagacgaccctgaacgtcggc
ccgaacaactgctatgcggcgatcgcacgcgccgccggccagaacgtcgacgccgacgac
gtggaggcgacagtcgccgacctgggagacgtcggcgacgtcgccgctgcgtacgacttc
ggtacccagcgagggctctccgcgttcgggacaggcgacgaggagtcgttgacggtcggc
ggagtccacgccgaactcgagacgctcgccaacgcgagcgggccggggagcaccgacgag
aaggtgaccatcctcttcggtctgttcaaccggtgttcgtcgaccgaggcgcgctatctt
gcccggctcgtcctctccgagatgcgtatcggggtcggggcgggcaccgtccgggacgcc
atcatcgaagcgttcgacgtctcggccgaggccgtcgagcgcgccctccaggtctcgaac
gattacggtctggtggccgagacggcccgagacgacccggatcgcctcgacgagatatcc
ctggagatcggacgccccgtccaggcgatgctcgcgcaggcgggcaccgcgggggacgcg
ctctcggcgtggggcgagacggtcgtcgagacgaaatacgacggggcacgggtccagatc
cacgtcgacgacggggtcgatatctactcccgaaacatggaggacgtgacagacccgctc
cccgacgtcgtcgagacggtcgaggaggccatcgacgtgcccgcgatcctcgacggcgag
gtgctggcgatcgacgagtcgggcgatcccctccccttccaggaggtcttgcgccgcttc
cggcggaaacacgacatcgagcaggccagtgcggcggtcgacctcgatctggtggtgttc
gactgtctccacgccgatggcgacgacctcatcgacgagccgctgtgcgaccgacgcgac
cgcctggaacggatctgggacggccacctcgccgacttctcgctcgccgctgagccggag
acgatcgcgcgcctggaggacgaggcgctcgacgcgggccacgaagggatcatgctgaag
gacccggactccgcgtacaccccgggccggcgcgggaaaaactggctcaagcgcaaaccg
gacgtcgagaccctcgatctcgtcgtgacgggcgccgagtggggtgaaggacggcgggcc
agtttcctgggatcgtacgagctctccgttcacacgccgaacgggtttgagaccgtcggc
aaggttgccacgggcatcaccgacgaggaactgaagcgactctccgccctcgtcgaaccg
aagattcgatctgaggacggacggaccgtcgacgtcgaaccgtcggtcgtcttcgaggtg
ggatacgaggagatccagcactcgcccacctattcgtcggggtacgcactcaggttcccg
cggtttatcggcgtgcgcgaggacctgaacgccgaggacgccgacacgctcgaccgcgtc
gaacgcctcgtcgacgcctga |
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