Halanaeroarchaeum sulfurireducens HSR2: HLASF_1984
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Entry
HLASF_1984 CDS
T03927
Symbol
rpoE2
Name
(GenBank) DNA-directed RNA polymerase subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HLASF_1984 (rpoE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsu03021
]
HLASF_1984 (rpoE2)
03019 Messenger RNA biogenesis [BR:
hsu03019
]
HLASF_1984 (rpoE2)
Transcription machinery [BR:
hsu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HLASF_1984 (rpoE2)
RNA polymerase I system
HLASF_1984 (rpoE2)
Messenger RNA biogenesis [BR:
hsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HLASF_1984 (rpoE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_ribbon_3
DZR
Zn_Ribbon_1
Zn_ribbon_15
Zn_Ribbon_TF
HypA
DUF7129
zf-ChsH2
Zn_ribbon_8
DUF7459
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AKH98451
UniProt:
A0A0F7PBA9
LinkDB
All DBs
Position
complement(1899558..1899755)
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACRECHHIIDPDENACPYCGSTSLTEDWAGYVVITHPEESEIAEKMEVTESGEY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaccggctcgcctgtcgggaatgccaccacatcatcgaccccgacgagaac
gcctgtccgtactgcgggtcgacctcgctcaccgaggactgggccgggtacgtcgtgatc
acccatcccgaggagagcgagattgcagagaagatggaagtaaccgaaagcggcgagtac
gccctcaaggtacgctaa
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