KEGG   Halanaeroarchaeum sulfurireducens HSR2: HLASF_2110
Entry
HLASF_2110        CDS       T03927                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
hsu  Halanaeroarchaeum sulfurireducens HSR2
Brite
KEGG Orthology (KO) [BR:hsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsu03016]
    HLASF_2110
Enzymes [BR:hsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     HLASF_2110
Transfer RNA biogenesis [BR:hsu03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    HLASF_2110
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL
Other DBs
NCBI-ProteinID: AKH98572
UniProt: A0A0F7PCX0
LinkDB
Position
2027780..2028337
AA seq 185 aa
MRLFVSVDLPDDLTEEVAAVQDRLEDASGLDFTDPAQAHVTMKFLGETPPHQVDEIVDAL
ETAVEESGVAPFEATYGGLGVFPSLDYISVVWLGVSDGEREFERLHAPIESELVDIGFDE
ADHEFTPHVTLARMNHAGGKDLVQRVVREESPVVGTATVGEVQLTESTLTSEGPVYETVA
SVPLE
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcgactgttcgtgagcgtcgacctcccggatgacctgaccgaggaggtcgccgcagta
caggacagactcgaggacgcatcgggactcgacttcaccgacccggcccaggcccacgtg
acgatgaagttcctcggcgagacgcccccacaccaggtggacgaaatcgtcgacgcgctc
gagacggccgtcgaggaatccggcgtcgcgcccttcgaggcgacctatggcggactgggc
gtcttcccttccctcgattacatcagcgtggtctggctcggcgtgagcgacggggagcgg
gaattcgaacgcctgcacgccccgatcgaatccgaactcgtcgacatcgggttcgacgag
gccgaccacgagttcaccccccacgtgaccctcgcgcggatgaaccacgccggcgggaag
gacctcgtccagcgcgtggttcgggaggagtcgccggtcgtcggaacggccaccgtcggg
gaggtccagctcaccgaaagcacgctcacctccgagggcccggtctacgagacggtcgcc
agcgttccgctggagtga

DBGET integrated database retrieval system