Halanaeroarchaeum sulfurireducens HSR2: HLASF_2110
Help
Entry
HLASF_2110 CDS
T03927
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsu03016
]
HLASF_2110
Enzymes [BR:
hsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HLASF_2110
Transfer RNA biogenesis [BR:
hsu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HLASF_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
AKH98572
UniProt:
A0A0F7PCX0
LinkDB
All DBs
Position
2027780..2028337
Genome browser
AA seq
185 aa
AA seq
DB search
MRLFVSVDLPDDLTEEVAAVQDRLEDASGLDFTDPAQAHVTMKFLGETPPHQVDEIVDAL
ETAVEESGVAPFEATYGGLGVFPSLDYISVVWLGVSDGEREFERLHAPIESELVDIGFDE
ADHEFTPHVTLARMNHAGGKDLVQRVVREESPVVGTATVGEVQLTESTLTSEGPVYETVA
SVPLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtgagcgtcgacctcccggatgacctgaccgaggaggtcgccgcagta
caggacagactcgaggacgcatcgggactcgacttcaccgacccggcccaggcccacgtg
acgatgaagttcctcggcgagacgcccccacaccaggtggacgaaatcgtcgacgcgctc
gagacggccgtcgaggaatccggcgtcgcgcccttcgaggcgacctatggcggactgggc
gtcttcccttccctcgattacatcagcgtggtctggctcggcgtgagcgacggggagcgg
gaattcgaacgcctgcacgccccgatcgaatccgaactcgtcgacatcgggttcgacgag
gccgaccacgagttcaccccccacgtgaccctcgcgcggatgaaccacgccggcgggaag
gacctcgtccagcgcgtggttcgggaggagtcgccggtcgtcggaacggccaccgtcggg
gaggtccagctcaccgaaagcacgctcacctccgagggcccggtctacgagacggtcgcc
agcgttccgctggagtga
DBGET
integrated database retrieval system