Halanaeroarchaeum sulfurireducens HSR2: HLASF_2132
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Entry
HLASF_2132 CDS
T03927
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03022
Basal transcription factors
hsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLASF_2132
09124 Replication and repair
03420 Nucleotide excision repair
HLASF_2132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsu03021
]
HLASF_2132
03036 Chromosome and associated proteins [BR:
hsu03036
]
HLASF_2132
03400 DNA repair and recombination proteins [BR:
hsu03400
]
HLASF_2132
Enzymes [BR:
hsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HLASF_2132
Transcription machinery [BR:
hsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HLASF_2132
Chromosome and associated proteins [BR:
hsu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HLASF_2132
DNA repair and recombination proteins [BR:
hsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HLASF_2132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
AAA_25
ATPase
nSTAND3
SLFN-g3_helicase
Zot
AAA_34
DUF6594
ArsA_ATPase
PhoH
Motif
Other DBs
NCBI-ProteinID:
AKH98593
UniProt:
A0A0F7PH59
LinkDB
All DBs
Position
2047249..2049429
Genome browser
AA seq
726 aa
AA seq
DB search
MTVAAEDYPSFFPKPEPYENQEPAMERIADALEEGRDVLFEGACGTGKTLAALAPALAYA
RANDKTVVITTNVHQQMRQFIHEAREINGEQPINAVVFKGKSSMCHIDVDYEECQVLRDN
THDLVDAQQELEELQERERELLERSQKGSAEAAESRQTVLEEIDQLEAQIEDLRSANTCE
HYYNNVTRNDDAFFGWLYDDVRTPEDIYDYAQDRGYCGYELLKEGMDGVDLAVANYHHLL
DPSIRTQFFRWLGRDPGDVVAVFDEAHNVEDAARDHATRTLSERTLDGAIDEMVDREDPR
AEAALRVFRPFRDALVDTYDESFGFGDREAVGPNWEDVPVANEEGRDDLTLAFLRQYEGP
DIEDDLRLAQQIGVDLDQQYEEAYKRGDANTRKESQTLTASVFVEAYLTEGDELGQYPTL
AVRRDEGRDEIIGRAELYTCIPRRVTEPLFDQVHASVLMSATLRPFDVFADVLGLDDPET
MAYGLSFPESRRRTFAVDVPPLFASKREDRSVQRTIADALADVVRFAPGNALFFFPSYGE
AERYHDLLGDRIDATRYLDRAGVSVEQRRTEFVADDNAVMFTSLWATLAEGVSFDGDDAR
TVAVVGVPYPHLDERADAVQTAYDEAFGDRADDAGWRYAVEIPTVRKTRQALGRVLRSPE
DFGARVLLDRRYTARSRTEMGEYSVNETFPPEERAELVDVQPRKLKYAMLNFFQDVDAYD
GDPPTP
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtggcagccgaggactacccgagtttcttcccgaagcccgagccgtacgagaac
caggagcccgcgatggagcgcatcgctgacgccctcgaggaggggcgcgacgtgctcttc
gagggggcctgcgggaccgggaagaccctcgccgcgctcgcacccgcgctggcctacgcg
cgggccaacgacaagacggtcgtcatcacgacgaacgtccatcagcagatgcgccagttt
atccacgaggcacgcgagatcaacggcgaacaacccatcaacgccgtggtcttcaaggga
aagtcctcgatgtgccacatcgacgtcgactacgaggagtgccaggtgctccgcgacaac
acccacgatctggtcgacgcccagcaggaactcgaggagctacaggagcgcgagcgggag
ttgctggaacggtcccagaagggcagcgccgaggccgccgagagccgacagaccgtcctc
gaggagatcgaccagctcgaagcgcagatcgaggacctgcgctcggcgaacacctgcgag
cactactacaacaacgtcacccggaacgacgacgccttcttcggctggctctacgacgac
gtccgcacaccggaggacatctacgactacgcccaggatcgagggtattgcgggtacgag
ttgctcaaggaggggatggacggggtcgacctggcggtcgcgaactaccaccacctcctc
gacccgagcatccggacgcagttctttcggtggctgggccgtgaccccggggacgtggtc
gccgtcttcgacgaggcacacaacgtcgaggacgcggcccgcgaccacgcgacccggaca
ctcagcgagcggacccttgacggagccatcgacgagatggtcgaccgagaggacccgcgc
gcggaggcggcgctgcgcgtgttccgcccgtttcgcgacgcactcgtcgacacctacgac
gagtcgttcggcttcggggaccgcgaggccgtcggccccaactgggaggacgtccccgtg
gcgaacgaggagggacgtgacgacctcacgctcgcgttcctccggcagtacgaggggccg
gacatcgaggacgacctgcgcctcgcccagcagatcggggtcgacctcgaccagcagtac
gaggaggcctacaagcgcggtgacgcgaacacgcgcaaagagagccagacgctgacagcg
agcgtcttcgtcgaggcctacctcacggagggcgacgaactgggccagtacccgacgctc
gccgtccgacgggacgaggggcgcgacgagatcatcggtcgcgcggagctgtacacctgc
atcccgcggcgggtcacggaacccctgttcgaccaggtccacgcgtcggtcctgatgagc
gcgacactgcggcccttcgacgtgtttgcggacgtgctcggcctcgacgatccagagacg
atggcctacggcctgagttttcccgagtcgcgccgtcggacattcgccgtggacgtccca
ccactgttcgccagcaagcgcgaggatcggtccgtccagcggaccatcgccgacgcgctg
gccgacgtcgtccggttcgcgcccgggaacgcactgttcttcttcccgagctatggcgag
gccgagcggtaccacgacctgctcggggaccggatcgacgcgacgcggtatctcgatcgg
gcgggcgtctccgtcgaacagcggcgcaccgagttcgtcgccgacgacaacgcggtcatg
ttcacctcgctgtgggccacgctcgcggagggggtcagtttcgacggcgacgacgcccgc
acggtcgcggtcgtcggtgtgccctatccgcatctcgacgagcgagccgatgccgtccag
accgcctacgacgaggccttcggggatcgcgccgacgacgccggctggcgctacgccgtc
gagattccgaccgtcaggaagacacggcaggcgctgggccgtgtgttgcgctcgccggag
gacttcggggcacgggtgctcctcgaccggcggtacaccgcccgcagccggaccgaaatg
ggcgagtacagcgtcaatgagacgttcccacccgaggagcgcgccgaactcgtcgacgtc
cagccgcggaaactcaagtacgcgatgctcaacttcttccaggacgtggacgcgtacgac
ggcgacccgccgacgccctag
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