Halanaeroarchaeum sulfurireducens HSR2: HLASF_3060
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Entry
HLASF_3060 CDS
T03927
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLASF_3060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsu03021
]
HLASF_3060
Transcription machinery [BR:
hsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HLASF_3060
Prokaryotic type
Archaeal type
TFB
HLASF_3060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
PHF5
DnaJ_CXXCXGXG
Zn_ribbon_6
DUF8122
Motif
Other DBs
NCBI-ProteinID:
AKH98686
UniProt:
A0A0F7PC10
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All DBs
Position
pHSR2-01:73877..74524
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AA seq
215 aa
AA seq
DB search
MSSIVPSKGEGVAVLASSLNTVRTMATRDIYETGFDEDVKMESSANQCPECDGRVTTNAV
ETVCEDCDLVIDEQRINHGPGWRAYDDKESERTCAPLTAARHDGGLSTEIGSGTDAKGNE
SPIGSSGSVGGQLILTTRQTGFHSHRSIRRPASAQPSMTKIRGVVLRMHTPRRRRPNSMS
TDSPSIPHTMTHLLLSNSPPVVILRPATSMAGPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctattgtcccctcaaagggtgagggggtcgcagtgctggcgagttccctgaac
acggtgagaacgatggcaaccagagatatctacgaaactggcttcgacgaagacgtcaaa
atggagtcgagtgcgaaccagtgtcccgagtgcgacggccgggtcacgactaacgctgtg
gaaacggtatgtgaggactgtgacctggtcatcgacgaacaacgcatcaatcacgggccg
gggtggcgggcatacgacgacaaggagagcgagcgaacgtgcgccccactcactgcggcc
cgccacgatggaggcttgtcgacggaaatcggtagcggcaccgacgcaaaggggaacgaa
tccccgatcgggagcagtgggtctgttggcgggcagctgatactgacgactcggcagacg
ggatttcactcacaccgatcgatccggcgaccggcgagcgcgcaaccttcgatgacgaag
atacgtggagtggttttgaggatgcatacgccacggcgacggcgtccgaactcgatgtcg
acggactcgccttctatcccacacacgatgacccatttactgctgtcgaactctccgcct
gtcgtgatcctgagaccggcgacctcgatggctgggcccggacggtga
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