Halanaeroarchaeum sulfurireducens HSR2: HLASF_3074
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Entry
HLASF_3074 CDS
T03927
Name
(GenBank) RecQ familyATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsu
Halanaeroarchaeum sulfurireducens HSR2
Pathway
hsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLASF_3074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsu03019
]
HLASF_3074
03400 DNA repair and recombination proteins [BR:
hsu03400
]
HLASF_3074
Enzymes [BR:
hsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLASF_3074
Messenger RNA biogenesis [BR:
hsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HLASF_3074
DNA repair and recombination proteins [BR:
hsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HLASF_3074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AKH98700
UniProt:
A0A0F7PES4
LinkDB
All DBs
Position
pHSR2-01:84863..86896
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AA seq
677 aa
AA seq
DB search
MERSIGPGAEFRTDQWEAIDRLVNRQERVFLVQRTGWGKSTVYFIATKLLREQGHGPTLI
ISPLLALMRNQIQDAETQLDLNAWTINSKNKEEWSEAKDAVREGRCDLLLISPERLANPE
FQEDVLLAMDEEFGLLVVDEAHCISDWGHDFRPDYRRIRRILQQLPDHIPVAATTATAND
RVVDDVTNQVPDLQVIRGDLVRKSLRLQTNKLGSRARRLAWLAENVPDLPSSGIVYCLTT
DEVETVAEWMRQQGLEFEPYHGGMDDERRRELEAQLMANEVDGLAATNALGMGFNKPDLG
WVIHFQRPPNLIRYYQEIGRAGRDLDDAFAVLLSGDEDNQIAEYFIGEAFPDPEEFEIVL
STLADSEVPLHKYQLLKRANISWKAASQCLDMVRVDNAVIRVEDGFERTAADWNYDHDRI
ASVTQQRRRELERIKQFVQTDDCLTRFIDDELDGSLEEDCGRCASCRGPVLPTEVQDESL
VSAAVEHYRAESVAEISPRYYMPKEDGRSKIAEERKPEPGRALAVYGDPGYGALVSQQFD
QDNGYSQKLVDAAVEYIKQEWTPSSSPTWVTAVPSPTGEEKVQDLARRIATGLGIDYVHA
VEQVEPMQPQHELANSYQKRWNVEGAFATTDEVRAEPVLLIDDTVGSRWSFTEAALMLRD
AGSGPVYPFALAERTRW
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtagtatcggaccgggggcggaattccgcacagatcagtgggaggctattgac
cggctggtcaaccgacaggagcgagtcttcctcgttcagcggactgggtggggcaagagc
acggtgtacttcatcgcaactaaactactccgtgaacagggccacggcccaacgctcatc
atcagtccgctactggcgctgatgcgtaaccagatccaggacgccgaaacgcagctcgac
ctgaacgcgtggaccatcaactccaagaacaaagaggagtggtccgaggcaaaagacgcc
gttcgcgaggggcgctgtgatctgctgctgatctcaccggagcgactggcgaatcccgag
ttccaggaggatgtgttactcgcgatggacgaggagttcgggcttcttgtcgtggacgaa
gcgcactgtatctccgattgggggcacgatttccgcccggattaccgccgaattagacgc
atcctccagcagctaccggaccacatcccggtggcggcgacgactgcaaccgccaacgat
cgagtcgtcgatgatgttaccaatcaagttcccgatctccaggtaatccgtggtgatctc
gtccggaagtcactgcgtctccagacaaacaagctggggtcacgggcccggcggctcgcc
tggctcgctgagaacgtccccgacctgccatcctcgggcatcgtgtactgcctgacgacc
gacgaggttgagacggtcgccgagtggatgcgacaacagggcctcgagttcgagccatac
catggcggaatggacgacgagcgtcgccgcgaactggaagcccaactcatggcgaacgaa
gtggacggcctggcagccacgaatgccctcgggatggggttcaacaaaccagatctgggc
tgggttattcacttccaacgtccgccgaatcttatccggtactaccaggagattggacgg
gcggggcgtgacctagacgacgccttcgctgtccttctctccggcgacgaggacaaccag
attgcggagtacttcatcggggaagcgtttcccgaccccgaggagttcgagatcgtactt
tcgacgctggcggacagcgaggtgccattgcacaagtaccagctcctcaaacgggcgaac
atctcctggaaggcggcctcccagtgtctagacatggttcgggtcgacaacgccgtcatt
cgggttgaggacggatttgagcggacagccgccgactggaactacgaccacgaccgcatc
gcgtcagtcacccagcaacgtcgacgggagctcgagcgtatcaagcagttcgtccaaacc
gacgactgtctgacccggttcatcgacgacgaattagatggctccctcgaggaggattgt
ggccgctgtgcctcctgtagggggccggtcctcccgacggaggtgcaggacgaaagcctc
gtttcggcggccgtagagcactaccgggctgaatcggtagccgagatatcgccccgatac
tacatgcccaaggaagacggccgctcgaaaatcgctgaagagcggaaacctgaaccgggg
cgtgcattggcagtttacggtgacccagggtatggcgcgctggtcagccaacagtttgac
caagacaatgggtacagccagaagctggttgacgccgcagtcgagtacatcaaacaggag
tggacaccgtcatcaagtccgacctgggtcactgctgttccctccccgacgggcgaggag
aaggttcaggatctcgccagacgaatcgcgaccggactgggaatcgattacgtccacgcc
gtcgaacaggtcgaaccgatgcagccccagcacgaactggcgaactcctaccagaaacgc
tggaacgtcgagggggcgttcgcgacgactgatgaggttcgggccgagcctgtcctgctg
atcgacgacactgtcggctcacggtggagtttcacagaggcggcactgatgcttcgcgat
gccgggagcggtccagtttatccctttgcgttggcagaacggacccggtggtaa
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