Billgrantia antri: HNO53_02090
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Entry
HNO53_02090 CDS
T08036
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hsv
Billgrantia antri
Pathway
hsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HNO53_02090 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsv03400
]
HNO53_02090 (sbcB)
Enzymes [BR:
hsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HNO53_02090 (sbcB)
DNA repair and recombination proteins [BR:
hsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HNO53_02090 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNO53_02090 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNO53_02090 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
tRNA_bind_3
Motif
Other DBs
NCBI-ProteinID:
QTP57619
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All DBs
Position
441102..442592
Genome browser
AA seq
496 aa
AA seq
DB search
MAKPNAAQMTFLWHDYETFGADPRRDRPSQFAAIRTDADFNEIGEPIELFCKPADDYLPH
PQACLITGITPQQARRRGLPEAEFAGRIHALMSEPGTCALGYNSLRFDDEVSRCLFYRNL
LDPYSREWQNGNSRWDLIDAVRAFHALRPAGIEWPRREDGSPSFRLEDLTAANGIVHEGA
HDALVDVRATIALARLLRQSNGRLFDHLLALRSKREVAKYLDIAGRKPVLHVSRRYPASR
GCSALVMPLAEHPTNPNGVIVYDLSVDPGALLELDAEQIRQRVFVSSDDLAEGEERIPLK
VIHINRSPVVLPAAALKEVEGPRKGEYGEIVERLGLDLAACRTYWKRLAASPEVAQKVSE
VFAQSPPEGPHDPDLMLYSGGFFSPADRQQMARVRETPPWDLVDARFAFQDPRLEEMLFR
YRARSYPDTLTSEEQARWEAYRWERMNDATVAGFTLKDFAREIERLNQVALSDRDRLILE
ELVMHVEAMMPAQAFG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccaatgccgcccaaatgaccttcctgtggcacgattacgagaccttcggc
gccgaccctcgtcgcgaccggccctctcagttcgccgcgatacgcaccgatgccgacttc
aatgagatcggcgagccgatcgagctcttctgcaagccggcggacgactacctgccacat
cctcaggcgtgcctgattaccggcatcacgccgcagcaggcgcgccgccgtgggctgccc
gaggccgaattcgccggccgtatccatgcgttgatgagcgagccaggcacctgcgcgctg
ggctacaacagcctgcgtttcgacgacgaagtgagccgctgcctgttctatcgcaacctg
ctcgacccctattcgcgggagtggcagaacggcaattcgcgctgggacctgatcgatgcg
gtgcgtgcctttcatgctctgcgcccggcaggtatcgaatggccacgccgcgaggacggc
tcgcccagcttccggctcgaggacctgaccgccgccaacggtatcgttcatgaaggggcc
cacgacgcgcttgtcgacgtgcgcgcgaccattgcactggcgcgattgctcaggcagagc
aatggccgcctcttcgaccacctgctggcgctgcgcagcaagcgcgaagtggccaagtat
ctcgacatcgcggggcgcaagccggtgctccacgtgtcgcgccgctatccggccagccgg
ggctgcagtgccctggtgatgccgttggccgaacaccccaccaaccccaatggggtaatc
gtttacgacctttccgtcgacccgggagccctgctcgagctggacgccgagcagatccgt
cagcgagtcttcgtcagcagcgatgacctggccgaaggcgaggagcggattccgctcaag
gtcatccacatcaatcgtagtccggtggtgctgccggccgcggcgctcaaggaggtggag
ggaccgcgcaagggcgaatatggcgagatcgtcgaacgcctggggctcgatctggcggca
tgccgcacctactggaagcgtctcgcagcgagccccgaggtggcgcagaaagtcagcgag
gtgttcgcccagtcgccgccggagggccctcacgatcctgatctgatgctctacagcggc
ggcttcttctcgcctgccgaccgtcagcagatggcccgggtgcgcgagacgccgccgtgg
gatctggtcgatgcccggttcgcctttcaggatccgcgcctggaagagatgctgtttcgc
tatcgggcccgcagctaccccgacacgctgaccagcgaggagcaggcgcgctgggaagcc
taccgctgggaacgcatgaacgatgcgacggtggccggtttcacgctgaaggatttcgcc
cgcgaaatcgagcgcctcaatcaggtggcgctgagcgatcgcgatcgcctgattctcgag
gaactcgtcatgcatgtggaagcgatgatgcccgctcaggccttcggctga
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