Halomonas sulfidivorans: HNO53_04310
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Entry
HNO53_04310 CDS
T08036
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HNO53_04310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsv03400
]
HNO53_04310
DNA repair and recombination proteins [BR:
hsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HNO53_04310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
QTP58016
LinkDB
All DBs
Position
complement(905025..906221)
Genome browser
AA seq
398 aa
AA seq
DB search
MPSPKSKAKPKDKRKTKKKDEPAHGEEKQRFHASGPRPLWSGTITFGLVSLPVNLYPANR
PKPVSLRMVDSDGTPLARRYFCEKEERVLDYDELIRGYEVEKNEFVVVEDRELDSLAPEK
SQEIDLKRFVGLDEIDPMYFERAYFMTPDKGVTKAYRLLAESMEATGRAGIATFVMRGKE
YLVAIIAEKGILRAETLRFAEELRTPDDIDLPEPPKVDKNRVKAMQQSIEALSEKELERE
ALQDRQSQRIIARAEEKLERGEDVIALGKEDEPDVDPEQGGEVIDLMQVLKQSLAEGRPP
GQEVRNDDGESQPRKRGKPTAKRSETKKRPSGQHGAGKKAAGQDDGKAAPRGKRRSAGLA
ELQNLSRDELYERARKLDVPGRSRMSKAELAKAVAGAR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgcctagcccgaaatcgaaagccaagccgaaggacaagcgcaagacgaagaagaaggac
gagccggctcatggcgaggagaagcagcgctttcacgccagcggcccgcgcccgctgtgg
tcgggcaccatcaccttcggcctggtcagcctgccggtcaacctctacccggccaaccgc
cccaagccggtgtcgctgcgcatggtcgacagcgacggcacaccgctggcgcggcgctac
ttctgcgagaaggaggagcgagtgctcgactacgacgagctgatccgcggctacgaggtc
gagaagaacgaattcgtcgtggtggaggatcgcgagctcgattcgctggcaccagagaaa
tcccaggagatcgacctcaagcgcttcgtcggcctcgacgagatcgatccgatgtacttc
gagcgcgcctacttcatgacccccgacaagggcgtgaccaaggcctaccgcctgctggcg
gaaagcatggaggccaccgggcgcgccggcattgccaccttcgtcatgcgtggcaaggag
tacctggtggcgatcatcgccgagaaaggcatcctgcgcgccgagacgctgcgcttcgcc
gaagaacttcgcactccggacgacatcgaccttcccgagccgcccaaggtcgacaagaac
agggtgaaggcgatgcagcagtccatcgaggcgctcagcgagaaagagctcgaacgcgag
gcgctgcaggaccggcagagccagcgcatcatcgcgcgtgccgaagagaagctagagcgc
ggcgaggacgtgatcgccctgggcaaggaagacgagccagacgtcgatccggaacagggc
ggcgaagtgatcgacttgatgcaggtactcaagcagagcctggccgaaggacgccctccc
ggccaggaggtgcgcaacgatgacggcgagagccaaccgagaaagcgcggtaagccgacg
gccaagcgcagcgagacgaagaagcgcccctcaggccagcacggcgcgggcaagaaggca
gccggtcaggacgacggcaaggccgcaccacgcggcaagcgccgcagcgccgggcttgcc
gaattgcagaatctctcccgtgatgaactctacgaacgcgcccgaaagctcgacgtgcca
ggccgcagccgcatgagcaaggccgaactggccaaggccgtcgccggcgcacgctga
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