Halomonas sulfidivorans: HNO53_06345
Help
Entry
HNO53_06345 CDS
T08036
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNO53_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsv03019
]
HNO53_06345
03009 Ribosome biogenesis [BR:
hsv03009
]
HNO53_06345
Enzymes [BR:
hsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HNO53_06345
Messenger RNA biogenesis [BR:
hsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNO53_06345
Ribosome biogenesis [BR:
hsv03009
]
Prokaryotic type
rRNA helicases
HNO53_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Terminase_6N
HEM4
Motif
Other DBs
NCBI-ProteinID:
QTP58359
LinkDB
All DBs
Position
1331022..1332737
Genome browser
AA seq
571 aa
AA seq
DB search
MTSTSVASPSFGDLALLPAVLAAVETLGYETPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLEMTRREPQVLVLAPTRELAQQVAVSFTKYGQNLQGLEVATLCGGQEYRE
QLGALKRGAQVVVGTPGRVIDHLDRGSLKLDGLSALVLDEADEMLRMGFIDDVKRVVADT
PKEAQRVFFSATLPTEIERIVNRYLVDPVKVAIESRTTTGENIEQRLVRVDGGAKLEALA
RILEVEPVDAAIVFVRTRAACTTLMEQLSARGVNVASLSGDLDQSLRERTIQRLKRGKVD
VLIATDVAARGLDVPRITHVFNYDLPQDSEAYTHRIGRTGRAGRTGISITFVGFREGRKV
GWIEQATGQRMTEMAVPDEAAIRAHRDEVFHQRIIGTLTAGADEQRALVERLVAEGHDPV
ELACAFAALARADEAPIGRLQAPRKERADRGERTASRDGKPPRRDRGPSEGMTRYRVAVG
HKDGVKPGQLVGALANEGGIEGSRIGRIDIRNAFSVVELPSSLPPSILAKMARARVAGRP
LEISEDGGAPERAPRRRREDGDAPVRRRTSA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacttctgtcgcctcgccgagcttcggcgatcttgctctgctgcctgccgtt
ctcgctgccgttgaaacactgggttacgaaactccttcaccgattcaggcgcagaccatt
ccggcactgctggaagggcgtgacatgctgggccaggcccagaccggtaccggcaagacc
gcagcctttgccttgccgctactgtcgcgtctcgaaatgacccggcgtgagccccaggtg
ctggtgttggcgccgacccgtgagctggcccagcaggtggccgtctcctttaccaagtac
ggccagaacctgcagggcctggaagtggcgaccctgtgcggtggtcaggaatatcgtgaa
cagctgggcgcactcaagcgtggcgcccaggtggtggtcggcacgccgggccgggtgatc
gatcacctcgaccgcggcagtctcaagctcgacggcctctccgcactggtactggacgaa
gccgacgagatgctgcgcatgggcttcatcgacgacgtcaagcgcgtggtcgccgatacg
cccaaggaagcccagcgggtattcttctccgccacgttgccgaccgaaatcgagcgcatc
gtcaaccgctacctggtcgatccggtcaaggtcgccatcgagtcgcgcaccaccaccggc
gagaacatcgagcagcgcctggtgcgcgtcgacggcggcgccaagctggaggcgctggca
cgcatcctcgaggtcgagccggtggatgccgccatcgtcttcgtgcgtacccgtgccgcc
tgcaccaccttgatggagcagctctccgcccgtggcgtgaacgtggccagtctctccggc
gacctggaccagagcctgcgcgagcgcaccatccagcgcctcaagcgcggcaaggtcgac
gtgctgatcgctaccgacgtggccgcccgtggcctcgacgtgccgcgtatcacccacgtc
ttcaactacgacctgccccaggacagcgaagcctatacccatcgcatcgggcgtaccggc
cgggctgggcgtaccggcatttcgatcaccttcgtgggcttccgtgaaggccgcaaggtg
ggctggatcgagcaggccaccggtcagcgtatgaccgaaatggcggtgcccgacgaggcc
gccatccgtgctcaccgtgacgaggttttccaccagcgcattatcggtaccctgaccgcc
ggcgccgacgagcagcgcgccctggtcgagcgactggtggcggaaggtcacgacccggtc
gagctggcctgtgcctttgccgccctggcgcgtgccgacgaggcgcccatcggccgcctg
caggcgccgcgcaaggagcgtgccgaccgtggtgagcgtactgcctcgcgtgacggcaag
ccgccgcgtcgcgaccgcggccccagcgagggaatgacccgctaccgcgttgccgtgggc
cacaaggacggcgtcaagccgggccaactggtcggtgccttggccaacgagggcggcatc
gaaggttcgcggatcggccgcatcgacatccgcaacgccttctcggtggtggagctgccc
agctcgctgccgcccagcatcctggccaagatggctcgcgcccgcgtcgccggtcgtccg
ctggagatcagcgaggatggcggtgctcccgagcgtgccccgcgccgtcgccgcgaggat
ggcgacgcgccggtgcgtcgtcgcaccagcgcctaa
DBGET
integrated database retrieval system
