Halomonas sulfidivorans: HNO53_07960
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Entry
HNO53_07960 CDS
T08036
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hsv
Halomonas sulfidivorans
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsv03016
]
HNO53_07960 (rnd)
Enzymes [BR:
hsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HNO53_07960 (rnd)
Transfer RNA biogenesis [BR:
hsv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HNO53_07960 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QTP58639
LinkDB
All DBs
Position
1698294..1699424
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AA seq
376 aa
AA seq
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MTLTPEIRWIDTPEALDAACAEVAQAEVIALDTEFFREKTFHPVPALIQFSVGGPAWLVD
PLVVECTDAFRRLLSQGSLKLLHASSEDLEVLAHWAGATVAPLVDTQIAQALLGEDPAMG
YQRLVQHWTGETLPKDETRSDWLQRPLSEAQCLYAALDVVFLLKVWERQREALERQGRRE
WLEADCRELLAQALRSDEADGQWYRRHRQLWRLAPRQIEAYRLLTTWREGEARRRNLPRG
WLVSDRVLYGIAERMPENRYQLAEVDDIKPSQIKRDGDTLLALLKQARQCEAEALPPALP
SPLGADYKRRMKALKRVVNERAERLGVAPEVLMRRRDLEALIAADLAAEPLPLPEGWRGE
CLSAPLARALDEVKAE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgacccccgagatacgctggatcgatacgcccgaagcgctggatgccgcttgc
gccgaggtggcccaggccgaggtgatcgcgctggataccgagttctttcgcgagaagacc
tttcacccggtgcctgcgttgatccagttctccgtcggagggccggcctggctggtcgat
cccctggtcgtcgagtgcaccgacgcctttcgtcggctgttgagccaggggtcgttgaaa
cttctgcacgccagcagcgaagacctggaggtgttggcgcactgggccggtgccacggtg
gcccctctggtcgatacccagatcgcacaggccctgctaggggaggacccggccatgggc
taccagcgcctggtacagcactggaccggcgagacgctgcccaaggatgagacccgttcc
gactggttgcagcgcccgctgagcgaggcccagtgcctctatgcggctctcgatgtggtg
ttcctgctcaaggtctgggagcgtcaacgtgaggcgctggagcggcaggggcggcgcgaa
tggctggaggccgactgccgcgagctgctggcgcaagcgctgcgtagcgatgaggctgac
ggccagtggtaccgccgtcatcgtcagctgtggcggcttgcgccgcgccagatcgaggca
tatcggctactgactacctggcgcgagggtgaggcccggcgacgcaacctgccgcgggga
tggctagtcagcgaccgggtgctttacggcatcgccgagcgtatgcccgagaatcgctat
cagctcgccgaagtcgacgacatcaagccgagccagatcaagcgcgatggcgatacgctg
ctggcattgttgaagcaggcgcgacagtgtgaggcagaagcgttgccgcccgcgctgcca
tctccgctgggggcggattacaagcgccgcatgaaggccctcaaacgggtcgtgaacgag
cgtgccgagaggctgggagtggcgccggaagtgttgatgcgtcgccgcgacctcgaggcc
ttgatcgcggccgacctggccgccgagccgttgcccctgcccgagggctggcgtggcgaa
tgcctgtcggctccgctggcaagagcacttgacgaggtgaaggccgaatga
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