Halomonas sulfidivorans: HNO53_17285
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Entry
HNO53_17285 CDS
T08036
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HNO53_17285 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsv03400
]
HNO53_17285 (recC)
Enzymes [BR:
hsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HNO53_17285 (recC)
DNA repair and recombination proteins [BR:
hsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNO53_17285 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QTP60311
LinkDB
All DBs
Position
3740275..3743868
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AA seq
1197 aa
AA seq
DB search
MPFAASQENALTPGFMVVHGNRLEDLRGVAVEWMKRHPLAPLENETILVQSNGIGQWMKL
ALAADEADGGSGIAAALDVTLPARFLWQAYRAVLNHVEGDPNAVPATSPFDKSHLLWRLL
RLLPELMPRDEFAPLRRFLEGDSDLRKHHQLAERLADLLDQYQVYRADWLEAWSRGEDVL
ISARGEARQLDDTQRWQPALWRAVVKSVAEDVGDDGVASSRAMVHRRFLDAARELHGGEC
PPGLPRRVMVFGISSLPQQALEALAAIARCCQVVLCVHNPCQHYWADIIEHKELLRSARR
RQRRKAGMPERLDVLGDGDGEESLHLHAQPLLAAWGKQGRDYLRLLDEHDDAQQYERLFA
ADSLRIDLFEPFVREGDGRLLQQLQDDIRELRPLHETRETWPAVDSARDDSIVFHVAHSP
QREVEILHDQLLAAFSADPDLKPRDVIVMVPDIDHYAPHVQAVFGQYARGQIERDDPRYI
PFTLSDQGSRHRQPLLIALEKLLRLPELRLSVSDLLDLLDVPALRARFGIQEDDVPTLRR
WVEGAGIRWGLDAGQRGSLDLPAGMEQNTWAFGLRRLLLGYAVGEAASGPWQGIEPFDDI
GGLEAALAGPLAALLETLEQQWRSLREPTDVAGWVQRLRALLEASFLAEAPEDSLMLAQL
EQALQSWQESAEEAGLTRELPLSVVREHWLSQIDEPSLSQRFLAGAVNFATLMPMRAIPF
KRVCLLGMNDGDYPRSHPPMDFDLMNGDYRPGDRSRREDDRYLFLEALLSAREQLYVSWV
GRSIVDNSEKPPSVLVGQLRDHLEAGWQTTDGSNLLEALSTEHPLQPFSRSYFPSEVQQA
ERSVSAQRLFTYAHEWREVHGETAASEAAVELKEFTHEAPLTLAQLGNFLRDPARAFFTT
RLKVHLEREDIVSLDHEPFALDGLANWQLQDLLIREQRRAVDEGQPREPAMLDTLDRLQG
QGVLAMGAFGERMRDQLIEPMSELFESYEEALAAWPRAVEEPEPVQLNVPGAPPLEDWLD
ELRESEAGERCRLVLASSSLVKKGKYRWSHILRHWVAHLAGHLNDRPMTTLLLSKAGHVT
LPPLDPEAARGHLREIVRTWQAGMRQPLPLACDTAFVWLSKLGTPESERASDAWRAAAST
YEGDSFNAGEAGRNAYLAHRWPSFTALYEARQDSLGFAELSERLLAPVHQAVKGKRS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgccgcttcccaggagaatgccctcacccccggcttcatggtcgttcacggc
aatcgcctggaggacctgcgcggcgtggcggtggagtggatgaagcgccacccgctcgcg
ccgctggaaaacgagaccatcctggtgcagagcaacggcatcggccagtggatgaagctg
gcgctggctgccgatgaggccgacggcggcagcggtatcgccgccgcgctcgacgtcacc
ctgccggcgcgcttcctgtggcaggcttaccgcgcggtgctcaaccacgtggaaggcgac
cccaacgcggtgccggccacctcgcccttcgacaagtcgcacctgctgtggcggctgctg
cgcctgctgccggagctgatgccgcgcgatgagttcgctccgctgcgccgcttcctcgaa
ggcgacagcgacctgcgcaagcaccaccagctcgccgagcgcttggccgacctgctcgat
cagtaccaggtgtaccgcgccgactggctcgaggcctggtcccgcggcgaggacgtgctg
atctccgcccgcggcgaggcccgccagctcgacgacacccagcgctggcagcccgccctg
tggcgggccgtggtgaaaagcgttgccgaagacgtgggcgatgacggcgtcgcctccagc
cgcgccatggtgcaccgccgttttcttgacgccgcccgcgagcttcatggaggcgaatgc
ccacccggcctgccgcggcgggtgatggtgttcggtatttcatcgctgccgcagcaggcg
ctggaagccctggccgccatcgcccgctgctgtcaggtcgtgctgtgcgtgcacaacccc
tgccagcactactgggccgacatcatcgagcacaaggagcttttaagatcagcgcgaagg
cggcagcggcgcaaggccggcatgcccgaacggctcgacgtactcggcgatggagatggc
gaagagagcctgcatctgcacgcccagccgctgctggccgcctggggcaagcagggccgc
gactacctgcgcctgctggacgaacacgacgacgcccagcagtacgaacgcctgttcgcc
gccgactcgctgcgcatcgacctgttcgagcccttcgtacgcgaaggcgacggccggctg
ctgcagcagttgcaagacgacatccgcgaactgcgcccactgcacgagacccgcgaaacc
tggccggcggtggactcggctcgcgacgactccatcgtcttccacgtcgcccacagcccc
cagcgcgaagtggagatcctgcacgaccagctgctcgccgccttcagcgccgaccccgac
ctcaagccccgcgacgtgatcgtcatggtgccggacatcgaccactacgcgccgcatgta
caggcagtctttggtcaatatgcgagagggcagatcgagcgcgacgatccgcgctacatt
cccttcacgctctccgatcagggcagccgccaccgccagccgctgttgatcgcgctggag
aagctgctgcgcctgccggaactgcgcctctcggtgagcgacctgctcgacctgctcgac
gtgcccgccctgcgtgcgcgtttcggcatccaggaagacgacgtacccaccctgcgtcgc
tgggtcgagggcgccggcatccgctgggggctcgacgccggccagcgcggcagcctcgac
ctgcccgccggcatggagcagaacacctgggccttcggcctgcgccggctgctgctgggc
tacgccgtgggcgaagccgcgagtggcccctggcagggcatcgagccgttcgacgacatc
ggcgggctggaagcggcgctggccggcccgctggccgcgctgctggaaaccctggaacag
cagtggcgcagcctgcgcgaacccaccgacgtggccggctgggtgcagcgcctgcgcgcc
ctgctggaggcgagttttctggcggaagcgcctgaagacagcctgatgctggcccagctc
gaacaggcgctgcagagctggcaggagagcgccgaggaagccggcctgacccgcgagctt
ccgctctcggtagtgcgcgagcactggctgagccagatcgacgagccaagcctgtcgcag
cgcttcctcgccggggcggtgaactttgccaccctgatgccgatgcgcgccatccccttc
aagcgggtgtgcctgctgggcatgaacgacggcgactacccgcgcagccacccgccgatg
gacttcgacctgatgaacggcgactaccgtcccggcgaccgctcgcgccgcgaggacgac
cgctacctgttcctcgaggccctgctctccgcccgcgaacagctctatgtgagctgggtg
ggtcgcagcatcgtcgacaacagcgagaaaccgccctcggtgctggtcggccagctacgc
gatcatctcgaagcgggatggcagacgaccgacggcagcaacctgctcgaagccctctcc
accgagcatccgctgcagccgttcagccgcagctactttcccagcgaggtgcagcaggcc
gagcgcagcgtttcggcccagcgattgttcacctacgcccacgagtggcgcgaggtgcat
ggagaaacggctgcatcggaagcggccgtagaactcaaggagttcacacatgaagctcct
ttgacgctggcacagctcggcaatttcctgcgcgacccggcacgcgccttcttcactacc
cgcctcaaggttcatctcgaacgtgaggacatcgtcagcctcgaccacgaacccttcgcc
ctggacggcctggccaactggcaattgcaggacctgctgattcgcgagcagcgccgcgca
gtggacgaaggccagccccgcgagcccgccatgctcgataccctcgaccggctacagggc
caaggcgtgctggccatgggtgccttcggcgagcgcatgcgcgaccagctcattgaaccc
atgtcggagctgttcgagtcctacgaggaagccctggcagcatggccccgtgcggtggag
gaacccgaaccagtgcagctcaacgtacccggcgcgccgccgttggaagactggctcgac
gaactgcgcgaaagcgaagcgggtgagcgctgccgccttgtgctcgccagcagtagcctg
gtgaagaagggaaagtaccgctggtcgcatatcctgcgccactgggtcgcgcacctggcc
gggcacctgaacgacaggcccatgaccaccctgctgctctccaaggccggccacgtcacc
ctgccgcccctcgacccggaagccgcccgcgggcacctgcgcgagatcgtccgcacctgg
caggccggcatgcgccagccgctgccgctggcctgcgacaccgccttcgtgtggctgagc
aaattgggaacaccggagagcgagcgcgccagcgacgcctggcgcgccgccgccagcacc
tacgaaggcgattcgttcaacgccggcgaggcgggccgcaacgcctacctcgcccaccgc
tggccgagttttaccgcgctctatgaagcccgccaggacagcctcggcttcgccgaactc
agcgaacggttgttagccccggtgcatcaggcggtcaaggggaaaagatcttga
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