Halomonas sulfidivorans: HNO53_19905
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Entry
HNO53_19905 CDS
T08036
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNO53_19905 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsv03019
]
HNO53_19905 (pcnB)
Enzymes [BR:
hsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HNO53_19905 (pcnB)
Messenger RNA biogenesis [BR:
hsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HNO53_19905 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QTP60776
LinkDB
All DBs
Position
4269183..4270583
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AA seq
466 aa
AA seq
DB search
MFKGFTRFLQSPGTHLRTLFGPQDASGGQAGPRIVPRDQHPISRQHFSEAALKVLYRLHN
AGFEAYLVGGCIRDSLLGKMPKDFDVATDATPEQVRELFRNSRIIGRRFRIVHVRFGREV
IEVTTFRGTHSDDHGDHIAQQSEHGLLLRDNVWGNIQEDAIRRDFTVNAIYYSIADFSIH
DFADGMRDIESRTLRLIGDPAVRYREDPVRMLRAVRFAAKLDFHIAPDSEAPIHELAPLL
LQIPPARLFDEVLKLFMAGHGVETFRLLRHYGLFAMLFPETDEAMAELSWAEPLLEEALA
STDRRIHEEKPVTPAFLFAALLWGPVQRRQSVLEAEGMPPIPALQLASQQVLSRQLKHIS
VPKRFSLPMRDIWDLQQRLPQRRGKRALQTREHPRFRAAYDFLLLRESAGEIEPGLGEWW
TAYQEGDEHEQRRLLEKAGADTGPGGNTPRRRRPRKRRRRSPSGPS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaggatttacccgctttctgcagagccctggcacacatctcaggacactcttc
ggcccccaggacgcttccggggggcaggcaggccctcgaatcgttccccgcgaccagcac
cccatttcgcgccagcacttcagcgaggcggcactgaaggtgctctatcgtctgcataac
gctgggttcgaggcctacctggtcggcggctgcattcgcgattccctgctcggcaagatg
cccaaggatttcgatgtcgccaccgatgccacgccggaacaggtgcgcgaactgttccgc
aactcgcgcatcatcggtcgccgcttccgcatcgtgcatgtgcgcttcggccgcgaggtg
atcgaggtcaccacattccgcggcactcacagcgacgaccacggcgaccatatcgcccag
cagtcggagcatggcctgctgctgcgcgacaacgtctggggcaatattcaggaagacgcc
attcgccgcgacttcaccgtcaatgcgatctactacagcattgccgatttctccatacac
gactttgccgatggcatgcgcgatatcgaatcgcgcaccctgcgcctgatcggcgacccg
gccgtgcgctatcgcgaggacccggtacgcatgctgcgtgcggtgcgcttcgccgccaag
ctcgacttccatatcgcgccggattcggaagccccgatccacgagctggcgccgctgttg
ctgcagattcctcccgcgcggctattcgacgaggtgctcaagctgttcatggccgggcac
ggcgtggagaccttccgcctgctgcgtcactacggcctgttcgccatgctgttccccgag
accgatgaggccatggccgagctgtcctgggcggagccgctcctagaggaggccttggcc
agcaccgacagacgcattcacgaggagaagccggtgactcccgccttcctcttcgccgcc
ttgctgtggggccccgtacagcgccgccagagcgttctggaagccgagggcatgccaccc
atccccgcgctgcagctcgcctcacagcaggtgctgtcgcgccagttgaagcacatttcg
gtgcccaagcgcttcagcctgccgatgcgcgacatctgggacctccagcagcgcctgccc
cagcgccgcggcaagcgcgcactgcagacccgcgagcatccccgctttcgcgccgcctac
gacttcctgctgctgcgcgagtccgccggcgagatagagcccgggcttggcgagtggtgg
acggcctatcaggagggcgacgagcacgagcagcggcgcctgctcgaaaaggcgggggcc
gataccggacccggcggcaacaccccccggcggcggcgcccgcgcaaacgccgacggcgc
agtccctccggtccctcatga
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