Halomonas sulfidivorans: HNO53_19935
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Entry
HNO53_19935 CDS
T08036
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNO53_19935 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsv03019
]
HNO53_19935 (pnp)
03016 Transfer RNA biogenesis [BR:
hsv03016
]
HNO53_19935 (pnp)
Enzymes [BR:
hsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HNO53_19935 (pnp)
Messenger RNA biogenesis [BR:
hsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HNO53_19935 (pnp)
Transfer RNA biogenesis [BR:
hsv03016
]
Prokaryotic type
tRNA degradation factors
HNO53_19935 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
QTP60782
LinkDB
All DBs
Position
complement(4274664..4276826)
Genome browser
AA seq
720 aa
AA seq
DB search
MSRDKLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDETVVLCTVVARKDTK
PGQDFFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEV
QVICTVLSTDRNHDPDIAAMLGTSAALAISGVPFNGPIGAARVGFDEEKGYFLNPTVEEL
ASSELDMVVAGTEKAVLMVESEADELLEDEMLGAVLYGHQEMQVAIRAINELVAEAGKPK
WEWQPPAENTALKQAVATAFEAKVGEAYRITDKMARQDALAALKEQAVEQLAGEEEGRFD
ADEVKGAFASLEKRVVRSRVIKGEPRIDGRDQKTVRPLAIEVGSLPKTHGSAIFTRGETQ
AIVIATLGTLRDAQLIESLEGERKDRFLLHYNFPPYSVGEAGFMGGPKRREIGHGRLARR
GVQAMLPDEADFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLV
KDENGFAVLTDILGDEDHLGDMDFKVAGSSAGVTALQMDIKIEGINEEIMEIALQQAHEA
RLHILEQMNTVIGQSRAEVSENAPSMATIKIDPEKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKKAIDIVLSITAEAEIGKLYKGKVVRIADFGAFVNIMPGTDGLV
HISQIVPERVNDVRDFLNEGDEVVVKVLDIDNRNRVKLTIKEIAPEEKAAFEAEQAETAL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagacaagttgaaggaagtcgccgtgaatccggtcaagaaaacgtttcagtac
ggtcgcagcaccgtcaccctggaaaccgggcgcatcgcccggcaggccaccggtgccgtc
atggtcaccatggacgagaccgtggtgctgtgcaccgtggtcgcccgcaaggataccaag
cccgggcaggatttcttcccgctgtcggtccactatcaggagaagacctacgcggtgggc
aagatccccggcggcttcttcaagcgcgaggggcgtcccaccgagaaggagaccctcacc
tcgcggctgatcgaccgccccattcgcccgctgttccccaagggcttcatgaacgaggtg
caggtcatctgtacggtgctctccaccgaccgcaatcatgacccggacatcgccgccatg
ctcggcacctccgcggcgctggcgatctccggcgtgccgttcaacggccccatcggcgcc
gctcgcgtcggtttcgacgaggagaaggggtatttcctcaaccccaccgtggaagagctg
gccagctccgagctggacatggtcgtcgccggtaccgaaaaggccgtgctgatggtcgag
tccgaggccgatgagctgctcgaggacgagatgctgggtgccgtgctctacggccaccag
gagatgcaggtggccatccgcgcgatcaacgagctggtcgccgaggccggcaagcccaag
tgggagtggcagccgcccgccgagaacaccgcgctcaagcaggccgtcgccaccgccttc
gaggccaaggtcggcgaagcctaccgcatcaccgacaagatggcgcgccaggatgcactc
gctgcgctcaaggagcaggcggtggagcaactggccggtgaggaagagggccggttcgac
gccgacgaggtcaagggggcgttcgccagcctcgagaaacgcgtggtgcgctcccgcgtg
atcaagggcgagccgcgcatcgacggtcgcgatcagaagaccgtgcggccgttggcgatc
gaagtcggcagcctgcccaagactcacggctcggcgatcttcacccgcggcgagacccag
gcgatcgtcatcgccactctgggtaccctgcgcgatgcccagctgatcgagtcgctggaa
ggcgagcgcaaggatcgcttcctgctgcactacaacttcccgccctacagcgtgggcgag
gccggcttcatgggcggccccaagcgtcgtgagatcggccatggccgtctggcgcgccgc
ggcgtgcaggcgatgctgcccgacgaggcggacttcccctataccattcgcgtggtctcc
gagatcaccgaatccaacggctccagctccatggcctccgtctgcggtgcctcgctggcg
ctgatggatgccggcgtgccgatgaaggccccggtagcggggatcgccatgggcctggtg
aaggatgagaacggtttcgccgtactcaccgacattctcggcgacgaggatcatctgggc
gacatggacttcaaggtcgcgggctcctccgccggcgtcacggccctgcagatggacatc
aagatcgagggcatcaacgaggagatcatggagatcgccctgcagcaggcccatgaggcc
cgcctgcacattctcgagcagatgaacacggtcatcggccagagccgtgccgaagtctcc
gagaacgcgccctccatggccaccatcaagatcgacccggagaagatccgcgacgtcatc
ggcaagggcggcgccaccatccgcaagatctgcgaggataccggcgcctccatcgacctg
gacgacgacggtaccgtgcgcatctacgccgaggacaaggcggcggcgaagaaggccatc
gacatcgtgctgtcgatcaccgccgaggccgagatcggcaagctctacaagggcaaggtg
gttcgcatcgccgacttcggtgccttcgtcaacatcatgccgggcaccgacggcctggtg
cacatctcgcagatcgtgcccgagcgggtcaacgacgtgcgtgatttcctcaacgagggt
gacgaggtggtagtcaaggtgctcgacatcgacaaccgcaaccgcgttaagctcaccatc
aaggagatcgcgccggaagagaaggccgccttcgaagccgagcaggccgagactgcgctg
taa
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