Halomonas sulfidivorans: HNO53_19945
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Entry
HNO53_19945 CDS
T08036
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hsv
Halomonas sulfidivorans
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsv03016
]
HNO53_19945 (truB)
Enzymes [BR:
hsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HNO53_19945 (truB)
Transfer RNA biogenesis [BR:
hsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HNO53_19945 (truB)
Prokaryotic type
HNO53_19945 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QTP60784
LinkDB
All DBs
Position
complement(4277339..4278256)
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AA seq
305 aa
AA seq
DB search
MARRRRGLPVNGVLLLDKPRGASSNHALQRVRRLLQAQKAGHTGTLDPMATGLLPVCLGE
ATKFSAHLLEADKVYRTRVQLGAVTDTGDAEGEVVERCEVPPLTPVDIERALERFRGEIE
QVPPMYSALKHQGRKLYELAREGKSVERAVRRVTVYDARLLAFEGDAFELEVRVSKGTYV
RTLAEDIGRALGSGAHITALRRLATGPFDSEGMLPIEALEALSGQEEREATLLPVDVLVA
HLPKVEVDERARQRLMHGQAASVAATGEKTGKLTRLYCDETFLGLGVVTGPQEVAPKRLL
NTAAD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccggcgtcgcggtctgccggtcaacggagtgctgctgctcgacaagcccaga
ggtgcgtcgagcaaccatgccttgcagcgggtacggcgcttgctgcaggcgcagaaggcg
ggccataccggcacgctggacccgatggcgaccgggctgttgccggtgtgcctgggcgag
gcgaccaagttctcggcgcacctgctcgaggccgacaaggtctaccgtacccgggtgcag
ctcggggcggtgaccgacaccggcgatgccgagggcgaggtggtcgagcgctgcgaggtg
ccgccactgacgccggtggatatcgagcgggcgctcgagcgctttcgtggcgagatcgag
caggtaccgccgatgtactcggcgctcaagcaccaggggcgcaagctctacgaactggcc
cgcgaaggcaagagcgtcgagcgtgcagtgcgccgtgtgacggtgtatgatgcccggctg
cttgccttcgaaggcgacgccttcgagctcgaggtccgggtcagcaagggcacctacgtg
cgcaccctggccgaggacatcggacgggcactcggcagcggggcgcatatcaccgccctg
cggcggctcgccaccggccccttcgacagcgagggcatgctgcccatcgaggcgctggaa
gcgctgtcgggccaggaggagcgcgaggcgacgctgctgccggtcgacgtgctggtggcg
catctgcccaaggtcgaggtcgacgagcgcgccaggcagcgactcatgcacggccaggcg
gccagcgtcgctgctaccggcgagaagaccggcaagctgacgagactctactgcgacgag
accttcctcgggctcggcgtggtgacggggccacaggaagtggcaccgaagcggctgctc
aatacggcagccgattga
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