Hymenobacter swuensis: Hsw_0176
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Entry
Hsw_0176 CDS
T03055
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsw03000
]
Hsw_0176
Transcription factors [BR:
hsw03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hsw_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
GAF_2
GAF_3
AAA_5
HTH_8
AAA
AAA_2
Mg_chelatase
AAA_16
AAA_22
AAA_3
Autoind_bind
STN1_2
DUF815
AAA_7
bpMoxR
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHJ95771
UniProt:
W8EZK5
LinkDB
All DBs
Position
complement(186983..189085)
Genome browser
AA seq
700 aa
AA seq
DB search
MPDQDDSLLLYLNEAIATTRNKEDLFRSVTEKLRLIFPFDAITILTLDAEHQYRRIFLRD
YLGEVLLPSQAGSKPLGRMPIEGTPIEQFVRQPHLFQYDLEELLTTYPQYLPFCALLERG
MRYFVVVPLRTGGRLIGLLSLVARRQPTFSPNDIDLLEKIGSLVAVAVTNTMAFEDIARR
EQEKSMQLALNNALLSIKERGELFRTIATEISQVVPCDYFGVRVRKSNSPVRALAEFNRQ
PDGSFAPLDASRHDELPQWAAAQETVLELFAAPGVYVGSDFEELARRYELLRFIREERGT
QSLLCTPLKTGEEPVVALILASRQPFAFTEENLELIQTLVPQVRLAIQNVLAFEQIEALR
TQLERERTYLIDEINTTAASRLDDFVGGSARMQQVYTRLSQVAPTDTTVLITGETGTGKE
LVARALHNLSPRRERALIKLNCAALPAQLIESELFGHEKGAFTGAHDRRIGKFELADGGT
IFLDEVGELPLDLQAKLLRVLQEKEFERIGGRRVIQTDVRVITATNRVLEEEVAAGRFRA
DLYYRLNVFPIRLPALRERPEDVEALMRHFLERFTKQMGKPVRGLRERDLRALQQYGWPG
NVRELEHVVEQAVIVSQGPFLEFQGFAAAAQTAPATAETGGPLKTLKDQERDHILTALYR
TGGRVSGPNGAAQLLGINPKTLEARMKKLGIQRTVEVRGQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccaagacgattctctgctgctttatctcaatgaggccattgccaccacccgc
aacaaggaggacctcttccggagcgtaacggaaaagctgcggttgatttttccgtttgat
gccattaccatcctcaccctcgatgccgagcaccagtaccgccggatattcctgcgcgac
tatctgggggaagtgctattacccagccaagccggcagcaagccactgggccgcatgccc
attgaaggcacgcctattgaacagttcgtacgccagccgcacctcttccagtatgacttg
gaggagctgctgaccacgtatccgcagtacctgcccttctgtgcgctgctggagcggggg
atgcggtattttgtggtagtgcccttgcggacgggcgggcggctcatcgggctgttgtca
ttagtagcccgccgacaacctacgttttcgcccaatgacattgatctgctggagaaaatc
gggagcctggtagccgtggccgtgaccaacaccatggccttcgaggatattgcccggcgg
gagcaggaaaaatccatgcaattggcgcttaacaatgcactgctcagcattaaggagcgc
ggagagttatttcgcaccattgccaccgaaatcagccaggtagtgccctgcgactatttt
ggcgtacgggtgcgcaaatccaactcgccggtgcgggccctggccgagttcaaccggcag
cccgacggcagcttcgccccgcttgatgccagtcgccacgacgagcttccgcaatgggcc
gctgcccaagagaccgtgctcgagctgtttgcggcccccggcgtatacgtgggctccgat
tttgaagagctggcccgacgctatgagctgctacgctttatccgggaggaacgcggcacg
cagtcgttgttgtgtaccccgctgaaaaccggcgaagaacctgttgtggccctaattctg
gccagtcggcagcctttcgccttcacggaggaaaacctggagctgattcagaccctggtg
ccccaggtccggctggccatccagaacgtgctggccttcgagcagattgaggcgctccgg
acccagctggaacgggaacgaacctacctcatcgacgaaatcaacaccacggccgcttcc
cgtctcgacgattttgtgggcggcagcgcccggatgcagcaggtgtatacccgcctgtct
caggtagcccccaccgataccaccgtgctcatcaccggcgagaccggcaccggcaaagag
ctggtggcccgggccctgcacaacctgtcgccccggcgcgagagggccctcatcaagctc
aactgtgctgccctgcccgcccagcttattgaaagtgagctgttcgggcacgaaaaaggg
gccttcacgggcgcgcacgaccggcgcatcggcaagtttgagctggccgatggaggcacg
atttttctggatgaagtgggtgagctgccgctggatctgcaggccaagctgctgcgcgta
ttgcaggaaaaggagtttgagcgcatcgggggccggcgggtaatccagaccgatgtgcgg
gtcataacggccaccaaccgggtgctggaggaagaagtggccgccggccgcttccgggcc
gatttgtactaccgcctcaacgtattcccgatccggctgcccgccctgcgcgagcggccc
gaggatgtggaggccctgatgcggcattttctggaacgcttcaccaagcagatgggcaag
cccgtgcgcggcctgcgggagcgggacctacgggctctgcaacagtacggctggcccggc
aacgtccgggaactggagcatgtggtggaacaggccgtaattgtgagtcaggggccattt
ctggagtttcagggctttgctgccgcggcgcagacggcacccgccactgcggaaacgggt
ggtccgctcaaaaccctgaaggaccaggaacgggaccatatcctgacggccctgtaccgc
accggcggccgggtcagcggcccgaacggcgcggctcagctgctcggcatcaaccctaaa
accctggaagcccgcatgaaaaaactcggcattcagcgcacggtggaggtgcgggggcag
taa
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