Hymenobacter swuensis: Hsw_0637
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Entry
Hsw_0637 CDS
T03055
Name
(GenBank) HAD superfamily protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hsw_0637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsw03019
]
Hsw_0637
Messenger RNA biogenesis [BR:
hsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Hsw_0637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
NttC
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHJ96232
UniProt:
W8EWS0
LinkDB
All DBs
Position
710113..711765
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AA seq
550 aa
AA seq
DB search
MVGVVLGRQLAGKARQDHEADAKARAQQLLAEAEAQATRTRDERIQQSKDKFRTLKQEFE
QESRRQKQALDQELTERRAAVVEQEQSIKQLSLTTQKQLETIQRKEKDLDATREKVELQA
QQQREKLEAQEEKRRATLENQLAKLEQREQEVEQELEETRQSLSEKIQLVTTQLETISGL
TAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLTATKDAKKVVLETIQRTAAEHAIENC
VSIFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREVARLSL
HLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGEKTIIDLGIHGLHPELIKMVGRMRFRS
SYGQNLLQHSREVANLCATMAAEMGLDVKKAKRAGLLHDIGKVSTEEPELPHAILGMEMA
KKYKEHPDVVNAIGAHHDEMEMTAMISPLVQACDAISGSRPGARREMMESYIKRLKQLEE
TANGFKGVNQCFAIQAGRELRVMVDAENVTDERAQELSYEISQKIEKEMQYPGQIKITVI
REMRAVAYAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggcgtggtactagggcgccagctggctggtaaagcccggcaggaccatgaagcc
gacgccaaagcccgcgcccagcagctgctggccgaggccgaagcccaggccacccgcacc
cgcgacgagcggattcagcagtcgaaagataaattccgcaccctcaagcaggaattcgag
caggaaagccgccgccaaaagcaggccctcgatcaggagttgaccgagcgccgggccgcc
gtggtggagcaggagcagagcatcaagcagctcagcctgaccacccagaagcagctggaa
accattcagcgtaaggaaaaagacctggatgccacccgcgaaaaagtggagctgcaggcc
cagcagcagcgcgagaagctggaagcccaggaggaaaagcgccgcgctaccctcgaaaat
cagttggccaaactggagcagcgcgagcaggaagtagagcaggagctggaggaaacccgc
cagagcctcagcgagaaaatccagctggtaaccacccagctcgaaaccatttcgggcctc
acggccgccgaagcccgcgagcagctggtggaaagcctcaagaacgaagcccagatccag
gccagctcctacatcaaggacgtggtggcccaggccaagctcacggccactaaggacgcc
aagaaagtagtgctggaaaccattcagcgcaccgccgccgagcacgccattgaaaactgc
gtgagcattttcaacatcgagtcggacgacgtgaagggcaagatcatcggccgcgagggt
cgcaacatccgggccctggaagccgctaccggcgtcgaaatcatcgtggatgatacgccc
gaggccatcatcatttcaggctttgaccccgtgcgccgcgaggtggcccgcctgagcctg
cacctgctggtgaaggacggccggattcacccggcccgcatcgaggagattgtggccaaa
acccgcaagaacatcgatgaggaaatcgtggaaatcggggagaaaaccatcatcgacctg
ggcattcacggcctgcaccccgagctgatcaagatggtgggccgtatgcgcttccgcagc
tcatacggtcaaaacctgctccagcatagccgcgaagtggctaacctctgcgccaccatg
gccgctgaaatgggacttgacgtgaaaaaagccaagcgagctggcctgctccacgacatc
gggaaagtaagcaccgaggagcccgagctaccccacgccatcctgggtatggagatggcc
aagaagtacaaggagcaccccgacgtggtcaacgccatcggtgcccaccacgacgagatg
gaaatgacggccatgatttcgcccctggtgcaggcctgcgacgccatttctggctcgcgt
cccggtgcccgccgcgagatgatggagagctatatcaagcgtctcaagcagctggaagaa
accgccaacggcttcaagggcgtcaaccagtgcttcgccatccaggccggccgcgagctg
cgcgtgatggtagacgccgagaacgtaaccgatgagcgagcccaggagttgagctacgaa
atctcgcagaaaatcgagaaggagatgcagtatcccggccagatcaaaatcaccgttatc
cgcgaaatgcgcgccgtggcctacgccaagtag
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