Hymenobacter swuensis: Hsw_1036
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Entry
Hsw_1036 CDS
T03055
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw00040
Pentose and glucuronate interconversions
hsw01100
Metabolic pathways
hsw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Hsw_1036
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsw_1036
Enzymes [BR:
hsw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Hsw_1036
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
AHJ96631
UniProt:
W8F207
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All DBs
Position
1174691..1175815
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AA seq
374 aa
AA seq
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MKTKTLSVNPFAAGALLAFSSLLLGCEATSPSPAATATASAQPADATTATCGAQGWASQN
GGTLGGGTATPTVVTTYAQLKAAITNASVKVVQVNGTITIPSGGRISFQDQTGKTIFGSA
GAKLVSADQTKDNSGIMYMKRCKNVLLRNLVFEGPGAYDTDGWDNVTVDASTNVWVDHCE
FRDGVDGNFDIKNASDYITVSWTKFAYLKPPKAGGSGGSNDHRYSNLIGSSDGATGDRGK
LRITFARCWWAQGCVERMPRVRFGKVHLVNNLYNSSNSKSCVQGGFEADVRIQANVFENV
GNAINLMDNKSTAVQEISNLFSNVSGTKVGNGKTAFTPPYTVSVLAATSVKAAVTAANGA
GATVGGNVCSNSGI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaacactctccgtcaaccccttcgcagccggcgcgctgcttgccttctcc
agcctgctgctgggctgcgaggccacgagcccttcgcccgctgccacggctaccgcttcg
gcccaaccggcggatgccactacggccacctgcggagcccaaggctgggcttcccagaac
ggcggcaccctcggcggaggcacggccacgcccacggtggtcaccacctacgcccagctg
aaagcggccattaccaacgccagcgtgaaggtggtgcaggtcaacggcaccatcaccatc
ccctcgggcgggcgaatttccttccaggaccaaaccggtaaaaccatcttcggctcggcc
ggggccaaactcgtgtcggccgatcagaccaaggataactcgggcattatgtacatgaag
cgctgcaagaacgtgctgctgcgtaacctcgtgtttgagggccccggggcctacgatacc
gacggctgggacaatgtgaccgtggacgcttccaccaacgtgtgggtagaccactgcgag
ttccgcgacggggtggacggcaacttcgacatcaagaacgcctccgactacatcaccgtg
tcgtggaccaagtttgcctacctgaagcccccgaaggccggcggctcgggcggctccaac
gaccaccgctactccaacctcatcggctcttcggatggggccaccggcgaccggggcaaa
ctgcgcatcacgtttgcccgctgctggtgggcgcagggctgcgtggagcgcatgccgcgc
gtgcggttcggcaaagtgcacttggtaaacaacctctacaacagcagcaacagcaagtcg
tgcgtgcagggcggtttcgaggccgacgttcgtattcaggccaacgtgtttgaaaacgtg
ggtaacgccatcaacctaatggacaacaaatcgacggcggtgcaggaaatcagcaacctg
ttcagcaacgtaagcggcaccaaagtcggcaacggcaaaacggccttcacgccgccctat
acggtgtcggtgctggcggccaccagcgtgaaagcggccgtcacggctgctaacggtgcg
ggggccaccgtgggtggtaacgtgtgctcgaatagcggtatttaa
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