Hymenobacter swuensis: Hsw_1268
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Entry
Hsw_1268 CDS
T03055
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hsw_1268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsw03019
]
Hsw_1268
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_1268
Enzymes [BR:
hsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hsw_1268
Messenger RNA biogenesis [BR:
hsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Hsw_1268
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hsw_1268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AHJ96863
UniProt:
W8EWC3
LinkDB
All DBs
Position
1433023..1434948
Genome browser
AA seq
641 aa
AA seq
DB search
MPDHATDDLLHVLRQTWGHAQFRPLQEDIIRSVLAGQDTLALLPTGGGKSICFQVPALAR
PGLCLVVSPLIALMKDQVENLRKRGIKAEAVYAGMSHQEIDQTLDNCVYGPVKFLYVSPE
RLLTDMFRARVGKMKVSLLAIDEAHCLSQWGYDFRPPYLRIQELRELLPGVPCMALTATA
TEQVRQDIVEKLHFGASHRVFQQSFARPNLSYSVLSTEDKLRRLLEVVRGVGKDKTSIVY
ARTRRQTEDTAAYLQQQGVAAAPYHAGLPAEQRTRTQQDWMQNRTRCIVATNAFGMGIDK
PDVRLVVHLEAPDNLEAYYQEAGRAGRDEKYAFAVLLQGPNDADELRRRTQQSFPPLDTV
RRVYQALANFSRTAVGGGELVAFDFDLQQFAETYRIRALDAHNSLRTLEREGFVQVNEAV
NNPARVHIPIDHTDLYCFQVANAQHDKLIKSLLRFHGGELFSGFQRISENSLAQHLRLSA
VELRKMLVFLHRSGIIQFQPRHESPQALFTTPRYDADKLPLDQKHLLQSRDLALHKTDAV
IRYAAGSRCRQQLLLEYFGELDAPACGVCDVCLARKKAQQAAAPTPELRAQLLALVQATP
QTPRQVLAHFTSAQATPVTELLRELVELGELRYAPDGRLVG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccacgctaccgacgacctgctgcacgtactccgccagacctggggccatgcg
cagtttcggccgttgcaggaagatattatccgctcggtgctggccgggcaggatacgctg
gcgctgctgcccaccggcgggggtaagagcatctgcttccaggtgccggcgctggcccgg
ccggggctgtgcctggtggtgtcgccgctgattgccttgatgaaggaccaagtggaaaac
ctgcgcaagcgcggcatcaaggccgaggcggtgtacgccggcatgagccaccaggaaatc
gaccagacgctggacaactgcgtgtacggcccggtgaagttcctgtacgtgtcgcccgag
cggctgctgacggatatgttccgggcccgcgtcgggaagatgaaggtgagtttgctggcc
attgacgaggcgcactgcctttcgcagtggggttacgatttccgccctccttacctccgg
attcaggagctgcgggaactgctgcccggcgtgccgtgcatggccctcacggccaccgcc
accgagcaggtgcgccaggatattgtggagaagctgcatttcggggcctcgcaccgggtg
tttcagcaaagcttcgcccggcccaacctgtcgtactcggtgctgagtaccgaggacaag
ttgcgacggctgctggaagtagtgcgcggggtggggaaggacaaaaccagcattgtgtac
gcccgcacccgccgccagaccgaggatacggccgcctacctgcaacagcagggcgtggcc
gccgcgccctaccacgccggcctgccggccgagcagcgcacccgcacccagcaggactgg
atgcagaaccgcacgcgctgcatcgtggccaccaacgccttcggtatgggcatcgacaag
cccgatgtgcggctggtggtgcacttggaggcccccgataacctggaagcctactaccag
gaggctggccgcgccggccgcgacgagaagtacgcctttgccgtgctgttgcagggcccc
aacgacgctgatgagctgcgccgccgcacccagcagagcttcccgcccctcgataccgtg
cgccgggtataccaggccctggccaacttctcgcgcacggccgtgggtggcggcgagctg
gtggccttcgacttcgatttgcagcagtttgccgaaacctaccgcatccgggccctcgac
gcgcacaatagcctgcgcacgctggagcgggaggggtttgtgcaggtgaacgaggccgtg
aacaatcccgcccgggtgcatatccccatcgaccacaccgacctgtactgtttccaggtt
gccaatgcccaacacgataagctcatcaaaagtctgctgcgctttcacgggggcgaactg
ttcagtggattccagcggatttcggagaacagtctggcccagcacctgcgcctgagcgcc
gtggagctgcgcaagatgctggtgtttctgcaccgctcgggcattatccagttccagccc
cgccacgagtcgccccaagccctgttcaccaccccgcgctacgatgccgacaagctaccc
ctcgaccagaagcacctgctccagtcgcgcgacttggccctgcacaaaaccgacgcggta
atccgatacgccgctggcagccgctgccggcaacaactgctgctggagtacttcggggag
ctggacgcgccggcctgcggcgtctgcgacgtgtgcctggcccgcaagaaggcccagcag
gcggccgccccgaccccggaactgcgggcgcagctgctggcgctggtgcaggccaccccc
cagacgccccggcaggtgctggcccacttcacgtccgcccaggccaccccggtaacggag
ctgctgcgggagttggtggaactgggcgaactgcgctacgcacccgacggccggctggta
gggtag
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integrated database retrieval system
