Hymenobacter swuensis: Hsw_1755
Help
Entry
Hsw_1755 CDS
T03055
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hsw_1755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_1755
Enzymes [BR:
hsw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Hsw_1755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hsw_1755
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hsw_1755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AHJ97350
UniProt:
W8F6H1
LinkDB
All DBs
Position
complement(2009253..2010071)
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVETYRRFLDELVTHQTITAFEVKDTHVLGVDEDTLRRAVVGRTVTGTSRLGKNC
FLLLDDGRVLVLHFGMTGDVGAYRDEADAPRFTRVALHLDSGLRVAFVDARKFGRIRLAD
SVDAYRQTKKLGPDALDITVEELQTKLSRRKTILKPLLLDQSLTAGLGNWIVDEVLFQAK
IHPERIANTLSEAEFRRLHASILLVLRTAIAHEANYRRFPASFLIHAREWDDSATPGTDA
HLHCPRHPRTLIAKTYVGGRATYTCPRCQPEV
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtcgaaacctaccgccgctttctcgatgagctggtcacgcac
cagaccattactgctttcgaagtcaaagacacccacgtactgggagtcgatgaagacacc
ctgcgccgcgccgtagtaggccgtaccgtcacgggtaccagtcgcctgggcaaaaactgc
ttcctgctgctggacgacggccgggtgctggtgctacatttcggcatgaccggcgacgtg
ggcgcctaccgcgacgaagccgacgccccgcgcttcacccgcgtagctcttcaccttgat
tccgggctgcgtgtggccttcgtggatgcccgcaaattcggccgcatccggctggccgac
agcgtggacgcctaccggcagaccaaaaagctggggccagatgctttggatattacggtt
gaggaactgcaaactaagctcagccggcgcaaaaccatcctcaagcctctactactcgac
caaagcctcacggccggattgggtaactggattgtagatgaagtactgtttcaggccaaa
atacatccggagcgtattgccaatacattatctgaggccgaattcaggcggctgcatgcg
tctattctattggtgttacgtacggctattgcgcacgaagccaactaccgccggtttccg
gccagcttccttattcacgcccgcgaatgggatgattccgctactcccggcaccgatgcc
catctgcactgtccccgccacccccgtacgctaatagcaaaaacctacgttggcggtcgg
gccacctacacctgcccgaggtgccagcctgaagtttga
DBGET
integrated database retrieval system
