Hymenobacter swuensis: Hsw_2087
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Entry
Hsw_2087 CDS
T03055
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03030
DNA replication
hsw03430
Mismatch repair
hsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hsw_2087
03430 Mismatch repair
Hsw_2087
03440 Homologous recombination
Hsw_2087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsw03032
]
Hsw_2087
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_2087
Enzymes [BR:
hsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hsw_2087
DNA replication proteins [BR:
hsw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hsw_2087
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hsw_2087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
Maf_N
RNase_H_2
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AHJ97682
UniProt:
W8F0X5
LinkDB
All DBs
Position
complement(2380214..2381710)
Genome browser
AA seq
498 aa
AA seq
DB search
MYAIIDLETTGGQPAQDRITEIAIYIHDGEKVVDEFSTLLNPGRNIPFFITQLTGITDDM
VREAPRFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
MPGQPSYSLGKLCQNIGIPLNGRHRAAGDAAATAILFGRLLAISQQQENPEAAGLTPADA
LAAVDANAPAGRKPETAAAATKQPSARKIKAVQDAIKTALLPPNITPEKVASLPHEAGVY
YFHNEAGEVIYVGKSINIYKRIQQHFAVDYKSRKSIEFKNSISDITWELTGSELVALLYE
SHEIKRLKPLYNRAQRRSVFPAGIFLRTDENGYKHLYYGRADDHAESHPLIALGNQYKAK
GFLFHKVAKFNLCQKLCDLYKTQGACFDYQVHRCKGACLGLEPAEEYNQRVEAAIESFTY
EHGSFVVIGQGRREDEKSLVVVENGRYLGFGYIDETFTARRFADFQDGITRYNDNKDVQQ
IIRQYLRTPHKDKVKVFK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgaccttgaaaccaccgggggccagcccgcgcaggaccgtatcacc
gaaattgccatttacattcatgatggcgagaaagtggtggatgaattcagcaccctgctc
aaccccggccggaacattcccttcttcattacccagctcacgggcatcaccgatgatatg
gtgcgggaggcacccaggttccatgaagtagcgcgcaaagtggtagaaatgaccgagggt
tgcgtgtttgtggcccacaacgtacgcttcgactactccttcctaaaaaaagagtttgcc
gacctaggctataattactcccgcaaaacgctgtgtacggtgcgcctgagccgctctctg
atgccgggccagccgagctacagcctgggtaagctgtgccagaacatcgggattccgctc
aatggccgccaccgcgccgccggtgacgcagcggctacggctatcctgttcgggcggctg
ctggccatcagtcagcagcaggaaaacccggaggcagcgggcctgacaccggccgatgcg
ctggccgctgtggatgccaacgccccggccggccgcaagcccgaaacggctgctgcggcc
accaagcagccgtcggcccgcaagatcaaggcggtgcaggatgctattaaaacggcgctg
ctcccgcccaacatcacccccgagaaggtggcctccctgcctcacgaagcaggggtatat
tacttccacaacgaggccggggaggtgatttacgtgggcaagagcattaatatctacaag
cggattcagcagcacttcgccgttgattacaagtcgcgcaagagcattgagtttaagaac
tcgatttcggatatcacttgggagttgacgggctcggaactggtggcactgctgtatgag
tcgcacgaaatcaagcgcctcaagccgttgtacaaccgcgcgcagcgccgctcggtgttt
ccggccggtatcttcctgcgcaccgacgaaaatggctacaagcacctctactacggccgc
gccgacgaccacgccgagtcgcacccgttgattgccttgggcaatcaatacaaggccaag
ggcttcctttttcacaaagtggccaagttcaacctctgccagaaactctgcgacctgtac
aaaacccagggggcctgctttgattaccaggtgcaccgttgcaaaggtgcctgcctgggc
ctggagccggccgaggagtacaaccagcgcgtggaggcggccatcgagtcgtttacctac
gagcacggctcgttcgtggtgattgggcagggccgccgcgaagacgagaagagcctagtg
gtagtggaaaacggccgctacctcggcttcggctacatcgatgaaactttcacggcccgc
cgcttcgccgatttccaggacggtattacgcgctacaacgacaacaaggacgtgcagcag
attatccgccagtacctgcgcaccccgcacaaggataaagtgaaggtgttcaagtga
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