Hymenobacter swuensis: Hsw_2403
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Entry
Hsw_2403 CDS
T03055
Name
(GenBank) (dimethylallyl) adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsw03016
]
Hsw_2403
Enzymes [BR:
hsw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Hsw_2403
Transfer RNA biogenesis [BR:
hsw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Hsw_2403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AHJ97998
UniProt:
W8EZE1
LinkDB
All DBs
Position
2704580..2706040
Genome browser
AA seq
486 aa
AA seq
DB search
MSQPLITLDFLDTPALPTPATDAATHAHEPSGEVRVNPATRTGKSRKLYIESYGCQMNFS
DSEIVSSILFNEGFDTTDSLEGADLVLLNTCSIREKAEQTVRMRLSQINGHKKRNPGLLV
GVLGCMAERLKSKFLEEEKLVDLVVGPDAYRDLPQLIQQVDGGQKAVNVLLSREETYADI
TPVRLNSNGITAFISIMRGCDNMCSFCVVPFTRGRERSRDAHSIVQEARDLVAQGYKEVT
LLGQNVDSYKWAADDGSEQVNFAQLLERVALISPELRVRFSTSHPKDITDEVLHTMARYD
NICKYIHLPAQSGNSRVLALMNRTYDRPWYEERVQAIRRILGEDCAISTDMISGFCSETE
EEHQDTLSLMEYVHYDMAYMFFYSERPGTLAARKLEDDVPLEVKKRRLAEVIALQQQHSR
LRNLRGVGQVHRVLAENFSKRSDEHLSGRNSQNQVVIFPKKHYKKGDYVDVLVHESTTNT
LLGEAI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccgctgataaccctcgatttcctcgatacccccgcgctgcccacccccgcc
acggatgccgccacccacgcccacgagccctcgggcgaggtgcgcgtgaacccggccacc
cgcacgggcaaaagccgcaagctctacattgagagctacggctgccagatgaacttctcc
gactcggaaatcgtgtcgagcatcctcttcaacgaaggcttcgacaccaccgactcgctg
gaaggggctgatctggtactgctcaacacctgctccatccgcgagaaggccgagcaaacc
gtgcgcatgcgcctctctcagatcaacggccacaaaaagcgcaaccctggcctgctggtg
ggtgtgctgggctgcatggccgagcgcctgaaaagcaagtttctggaagaagagaaactg
gtggatctggtggtaggccccgatgcctaccgcgacctgccccagctgattcagcaggtg
gatggtggccagaaagccgtgaacgtgctgctgagccgcgaggaaacctacgccgacatc
acaccggtgcgcctgaactcgaacggtattacggccttcatcagcatcatgcgcggctgc
gacaacatgtgctccttctgcgtggtgcccttcacccggggccgcgagcggagccgcgac
gcgcacagcatcgtgcaggaagcccgcgacctagtggcccagggctacaaggaagtgacc
ctgctgggccagaacgtggattcctacaagtgggccgccgatgacggctccgagcaggtg
aacttcgcccagctgctggagcgcgtggccctcatcagccccgagctgcgggtgcgcttc
tccacctcccaccccaaggacatcaccgacgaagtgctccacacaatggcgcgctacgac
aacatctgcaagtacatccatttgcccgcccaaagcggcaactcgcgggtgctggccctg
atgaaccgcacctacgaccggccctggtacgaggaacgcgtgcaggccatccgccgcatt
ctgggcgaggactgcgccatcagcaccgacatgatttcgggcttctgctccgaaactgag
gaggagcaccaggacacgctgagcctgatggaatacgtgcattacgacatggcctacatg
ttcttctactcggagcgccccggcacgctggccgcccgcaagctggaggatgatgtgccg
ctggaagtgaaaaagcgtcgtctggccgaagttattgccctgcagcagcagcacagccgc
ctgcgcaacctgcgcggcgtaggccaagtgcaccgcgtgctggccgagaacttctccaaa
cgcagcgacgagcacctgagcggccgcaacagccagaaccaggtcgtcatcttccccaaa
aagcactacaaaaaaggcgactacgtggacgtactcgtgcacgagtccaccacgaatacg
ctgctgggcgaagcaatttag
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