Hymenobacter swuensis: Hsw_2409
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Entry
Hsw_2409 CDS
T03055
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hsw_2409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsw03019
]
Hsw_2409
03110 Chaperones and folding catalysts [BR:
hsw03110
]
Hsw_2409
03029 Mitochondrial biogenesis [BR:
hsw03029
]
Hsw_2409
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsw04147
]
Hsw_2409
Enzymes [BR:
hsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Hsw_2409
Messenger RNA biogenesis [BR:
hsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Hsw_2409
Chaperones and folding catalysts [BR:
hsw03110
]
Heat shock proteins
HSP60 / Chaperonin
Hsw_2409
Mitochondrial biogenesis [BR:
hsw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Hsw_2409
Exosome [BR:
hsw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hsw_2409
Exosomal proteins of other body fluids (saliva and urine)
Hsw_2409
Exosomal proteins of breast cancer cells
Hsw_2409
Exosomal proteins of colorectal cancer cells
Hsw_2409
Exosomal proteins of bladder cancer cells
Hsw_2409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHJ98004
UniProt:
W8EY37
LinkDB
All DBs
Position
2711077..2712717
Genome browser
AA seq
546 aa
AA seq
DB search
MAKNIQFDTEGRDKLKRGVDKLANAVKVTLGPKGRNVVIDKKFGAPSITKDGVTVAKEIE
LSDPVENMGAQLVKEVASKTADQAGDGTTTATVLAQAIYAAGSKNVAAGANPMDLKRGID
KAVVAVVANLKAQSKKIENSSEIAQVGAISANNDMEIGKMIADAMDKVGKEGVITVEEAR
GTETEVKTVEGMQFDRGYLSPYFVTNPEKMEAEFDNPYILIYDKKVSTMKELLPVLEQVV
QSGKPLVIISEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEERGYKLDSATLEYLGQAEKVIIDKDNTTIVNGRGEKDGITSRVNEIKSQIEKTTSDYD
KEKLQERLAKLSGGVAILYIGASTEVEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
ALDALDAVDTHNGDERTGVNIIRTALEAPLRTIVQNAGGEGSVVVQKVREGKGDYGYNAR
EDRYENLMAAGILDPTKVTRLALENAASIAGLLLTTECVISDEPEDDKGGAGAGAAGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaacatccaattcgatacagaaggccgcgacaagctgaagcgcggcgttgac
aaactggcaaatgccgtaaaggtaaccctcggccccaaaggccgcaacgtggttatcgac
aagaaattcggtgcgcccagcatcaccaaggacggcgtgaccgtggccaaggagattgag
ctgagcgacccggtagaaaacatgggtgctcagctggtgaaggaagtagccagcaaaacc
gccgaccaggccggtgacggcactaccacggctaccgtactggcccaggccatctacgcg
gccggctcgaagaacgtagccgccggggctaacccgatggacctcaagcgcggcatcgac
aaagcggttgtagctgtagtggccaacctgaaggcccagtcgaagaaaatcgaaaactcc
tcggaaattgcccaggtaggcgctatttcggccaacaacgacatggaaatcggcaaaatg
attgccgacgccatggacaaagtaggtaaggaaggcgtgattactgtggaggaagcccgt
ggcaccgaaaccgaagtgaaaacggtggaaggcatgcagttcgaccgtggctacctctcc
ccctacttcgtgaccaacccggagaagatggaggccgagttcgacaacccttacatcctc
atctacgacaagaaggtgagcaccatgaaggagttgctgcccgtgctggagcaggtggta
cagagcggtaagccgctggttatcatttccgaagacgtggacggcgaagccttggctaca
ctggtagtaaacaagctgcgcggctcgctgaaaattgccgccgtgaaagctcccggcttc
ggtgaccgtcgcaaagccatgctggaagacattgccgttctgacgggcggtacggttatc
agcgaagagcgtggctacaaactcgacagcgctacgctggagtacttgggtcaggctgag
aaggtgattatcgataaagacaacacgaccatcgtgaatggccggggcgagaaagacggt
atcaccagccgcgtaaacgaaatcaagtcgcagatcgagaaaaccacttctgactatgac
aaggagaaactgcaggagcgtttggccaagctgtcgggcggcgtagctatcctctacata
ggtgcgagcactgaggtagaaatgaaagagaagaaagaccgggtagacgatgccctgcac
gccacccgcgccgccgttgaggaaggcgtggtacccggcggtggcgtggccctagtgcgt
gccctcgatgcgctggacgcagtggacacccacaacggcgacgagcgtaccggtgtgaac
atcatccgtaccgccctggaggctcctttgcgtaccatcgtgcagaacgccggtggcgaa
ggctcggtggtagtgcagaaggtgcgtgaaggcaaaggcgactacggctacaacgcccgc
gaggaccgttacgaaaacctgatggctgccggtatcctcgaccccaccaaagtaacgcgt
ctggccctggaaaatgccgcttctatagctggcctgctcctgaccactgagtgcgttatt
tcggatgagcccgaagatgacaaaggtggtgccggtgccggcgctgctggtggcatgggt
ggtatgggcggtatgatgtaa
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