Hymenobacter swuensis: Hsw_2609
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Entry
Hsw_2609 CDS
T03055
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03420
Nucleotide excision repair
hsw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hsw_2609
03430 Mismatch repair
Hsw_2609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_2609
Enzymes [BR:
hsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hsw_2609
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hsw_2609
MMR (mismatch excision repair)
Other MMR factors
Hsw_2609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
PAH
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ98204
UniProt:
W8EYL1
LinkDB
All DBs
Position
2921201..2923462
Genome browser
AA seq
753 aa
AA seq
DB search
MGLDYHSLLNPSQAAAVLHTEGPCMIIAGAGSGKTRVLTYRIAHLLEKQVNPFNILALTF
TNKAAKEMRARIEKVVGPEAKNLWMGTFHSIFARILRSEADKIGYPRSFTIYDTQDSKTL
IGQILKELEIDDKLYKPNMVLGRISSAKNKLISVQQYLNDPVIRQDDEASLRPKLGVIYQ
QYANRCFKAGAMDFDDLLYQTNVLFKDHPDVLNKYQNMFRYVMVDEYQDTNYSQYLIARK
LAAKERNICVVGDDAQSIYAFRGADIQNILNFEKDYPELQVFKLEQNYRSTKNIVWAANS
VIKNNQAQLRKDVFSDNEEGPLIEVLKAASDNEEGKLVAQSIYEDKMNQHLSYDDFAILY
RTNAQSRAMEESLRKLNIKYKIVGGLSFYQRKEIKDLVAYLRLTVNPNDEQALRRVINYP
KRGIGDTTLAKLISSAEETNHTIWEVVSNADKFLPTRTANPIVDFAEKIKAYTAVAAKDD
AFEAAKFIAKNSGMIEELYADKSIEGLSRYENIQELLNGVKAFVEDPEREEKSLGAFLQD
IALVTDADTKDAQAEGEQVTMMTIHSAKGLEFRNVYIVGMEENLFPSQMMITSRADLEEE
RRLFYVAITRAEKKLTLSYATSRYQWGNLRSCEKSRFLDEIDPKFVDFKYSAGPGPDRAG
PGESPFGHVFERRSNLIPPPPRKTVATKYVAPADFKPSDTSKLQVGQRVEHPKFGFGTVS
KLEDQAGSIKAIIQFEEVGEKTLLLSFAKLRLH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggactcgattatcactcgttactgaacccctcgcaggccgcggcggtgctgcacacc
gaaggcccctgcatgattatagccggcgcgggctcgggcaaaacccgggtgctcacctac
cgcattgcccacctgctggagaagcaggtgaacccgttcaacatcctggccctcaccttc
accaataaggccgccaaggagatgcgcgcccgcattgagaaggtggtcggccccgaggct
aaaaacctgtggatgggtacttttcacagcattttcgcccggattctgcgctctgaagcc
gacaaaatcggctacccccgctccttcaccatctacgatacccaggactccaaaaccctt
atcgggcagattctgaaggagctggaaatcgacgataagctctacaagcccaacatggtg
ctgggccggatttcctcggccaagaacaagctgatttcggtgcagcagtacctcaacgac
cccgtaatccggcaggacgatgaggcctcgctgcggcccaagctgggcgtgatttaccag
cagtacgccaaccgctgcttcaaggccggggccatggacttcgacgatttgctctaccag
accaatgtgctgttcaaagaccaccccgacgtgttgaacaagtaccagaatatgttccgg
tacgtgatggtggacgagtaccaggacaccaactactcccagtaccttattgcccgcaag
ctggccgccaaggagcgcaacatctgcgtggtgggcgacgacgcgcaaagcatctacgcc
ttccggggcgccgatattcagaacattctcaacttcgagaaggactaccccgagctgcag
gtgttcaagctggagcagaactaccgctccaccaagaacatcgtgtgggcggccaactcg
gttatcaagaacaaccaggcccagctgcgcaaagacgtgttttccgacaacgaggaaggc
ccgctgattgaggtactaaaggccgcctccgacaacgaggaaggcaagctggtggcccag
agcatctacgaggacaagatgaaccagcacttgtcgtacgacgactttgccatcctgtac
cgcaccaacgcccagagccgggccatggaggaatcgttgcgcaagctcaacatcaagtac
aagattgtgggcggcctgagcttctaccagcgcaaggaaatcaaggacctggtggcctac
ctgcgcctcaccgttaacccgaatgatgagcaggccctgcgccgcgtgattaactacccc
aagcgcggcattggcgacactaccctggccaagctaatttcttcggccgaggaaaccaac
cataccatctgggaagtggtcagcaacgccgataagtttctgcccacccgcacggccaat
cccatcgtcgacttcgccgagaaaatcaaggcctacaccgccgtggcggccaaggatgat
gcgtttgaggcagccaagttcattgccaagaactcgggcatgattgaggaactctacgcc
gacaagagcattgagggcctgagccgctacgagaacattcaggaacttctgaacggcgtg
aaggccttcgtggaagaccccgagcgggaggaaaaaagcctcggcgccttcctgcaggac
attgctctggtcacggatgccgacaccaaggacgcccaggccgagggcgagcaggtgacc
atgatgacgattcactcggccaagggcctagagttccgcaacgtgtacatcgtgggcatg
gaggaaaacctgttcccgagccagatgatgattacctcccgggccgacttggaggaggag
cgccggctgttttacgtggccatcacccgggccgagaagaagctgaccctgagctatgcc
acttcccgctaccagtggggcaatctgcgcagctgcgagaaaagccgcttcctcgacgaa
atcgacccgaagtttgtggacttcaagtactcggccggccccggacccgaccgcgccgga
ccgggcgagtcgccgtttggacatgtgtttgaacgccgctcgaacctgattccgccgccg
ccgcgcaaaaccgtggccaccaagtacgtagcccccgccgacttcaagccctccgatacc
agcaagctgcaggtgggccagcgcgtggagcatcccaagttcgggttcggcaccgtgagc
aagctcgaagatcaggctggctctatcaaggccattatccagtttgaggaagtgggcgag
aaaaccttgctgctaagcttcgccaagctgcggctacactag
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