Hymenobacter swuensis: Hsw_2622
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Entry
Hsw_2622 CDS
T03055
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsw03032
]
Hsw_2622
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_2622
Enzymes [BR:
hsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hsw_2622
DNA replication proteins [BR:
hsw03032
]
Prokaryotic type
DNA Topoisomerases
Hsw_2622
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hsw_2622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AHJ98217
UniProt:
W8F2G5
LinkDB
All DBs
Position
2938631..2941129
Genome browser
AA seq
832 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPKDNNAIDVANGFKPTYVVSADK
RELISQLKKLAKEAEVVWLASDDDREGEAISWHLAETLNLTGGDKTRRIVFREITKNAIL
TAIDNPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRLVVERE
REINQHKTSSAYRVVARFDAGRGAVLEAELPTRYKTREEAEAFLARCVGATYRIENLEKK
PGKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALAA
AQEEISRAYGPEYAQTRVYKTKSASAQEAHEAIRPTDFALLKAGSDSQEQRLYDLIRKRA
MASQMADAVIERTVATIGISTQPGVTLTATGEVITFEGFLKAYAESKDEEEQDEAAESSF
SRGLPPLSVDQELPLQVLRATERFASPAARYTEASLVKKLEEMGIGRPSTYAPTISTIQK
RGYVEKDSREGKERKFHVLTLEGDAVKTEVKTETYGADKAKLFPTDTAMVVNDFLVEHFP
VIVDYQFTAKVEDEFDRIADGKEVWTDMLAGFYGTFHETVERGQNIERNTLGSNREIGLH
PETGQKLTARLGRFGPYVQIEPLEGAPEGEKAVYASLRKGQFIENITLEEALELFKLPRI
VGSFEDKDMTAALGRFGPYIRHDSKFYSLTKEQDPHTITAQEGVDLIENKRKTDAERLIK
SFAENPDVQVLNGRFGPYIVAGKKNVKIPKGEEPADLTLERCLELADATPDKPAKGGRFA
KKAAPAEKTEKADTPAKKPAAKKAATKKPAAKKATGTTGAKKAAPKAAPKAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaatctagtcatcgtcgaatccccggccaaggccaaaaccatcgaaggttac
ctgggcaaggactttgtggtgaagtcttcgttcggccacgtgcgcgacctgcccaaggac
aacaacgccattgacgttgccaacgggttcaagcccacctacgtcgtttcggccgataag
cgcgagctgatcagccagttgaaaaagctggctaaggaggcggaagtggtatggctggcg
agtgacgatgaccgggagggcgaagccatcagctggcacctggccgaaaccctgaatctg
accggcggcgacaagacgcgccgcatcgtgttccgtgaaatcaccaagaacgccatcctc
accgccattgataatccccgggaaatcgacctgaacctggtgaatgcccaacaggcccgc
cgcgtgctcgaccggttggtgggcttcgaactgagtccggtgctgtggaagaaggtaaag
gccggtctttcagcgggccgggtgcagagcgtggccgtgcgcttggtggttgaacgcgag
cgggaaatcaaccagcacaaaacctcctccgcctaccgcgtggtggcccgcttcgatgcc
ggccggggcgcggtgctggaggccgagctgcccacccgctacaaaacccgcgaggaagcc
gaggcgtttctggcccgctgcgtgggcgcaacgtaccgcatcgagaacttggagaagaag
cccggtaagcgcagcccggcgccgccgtttactacttctacgctgcagcaggaggcctcg
cgcaagctgggcttctcggtggcccagacgatgagcgtggcccagaagctctacgaagcc
ggtaagatttcctacatgcgaaccgactcggtaaacctctcgcaggacgcgctagccgct
gcccaggaggaaatcagccgcgcctacggtcccgagtacgctcagacccgggtatacaaa
accaagtcggcctcggcccaggaggcccacgaagccatccgccccaccgactttgctttg
ctgaaagcgggttccgactcgcaggagcagcgactatacgacctgatccggaagcgggcc
atggcctcgcagatggccgacgcggtgattgagcggacggtggccaccatcggcatcagc
acccagcccggcgtcacgctcacggccaccggtgaggttatcacctttgagggtttcctg
aaagcctacgccgaaagcaaagacgaggaggaacaggacgaagccgccgaatcgtcgttt
tcgcgggggctgccgccgttgagcgtggaccaggagctgcctttgcaagtattgcgcgcc
accgagcggtttgcctcgccggcggcccgctacacagaagcttcgctagtgaaaaagctg
gaagaaatgggtattggccggccttccacctacgcccctaccatcagcaccattcagaag
cgcggctatgtggaaaaagactcccgcgaaggcaaggagcgcaagttccacgtgctcacg
ctggagggcgacgcggtgaaaaccgaagttaaaaccgaaacctacggggccgataaagcc
aagctgttccccacggatacggccatggtggtcaacgactttctggtggagcacttcccg
gtgattgtggactaccagttcacggccaaggtggaggacgagtttgaccgcattgccgac
ggcaaggaagtgtggaccgacatgctggccggcttctacggcacctttcacgaaaccgtg
gagcgcggccagaacattgagcgcaacacgctgggcagcaaccgggaaattgggctgcac
cccgaaaccggccagaagctaaccgcccgtctgggccgcttcggaccgtacgtgcagatt
gagccgctggaaggtgcgcccgagggcgagaaggccgtgtacgccagcctccgcaagggc
cagtttattgagaatatcaccctggaagaggcgctggagctgtttaagctgccgcgcatc
gtgggctcgttcgaggacaaggacatgacggccgcgctgggtcggttcggcccttacatc
cgccacgacagcaagttctattccctcaccaaggagcaggacccgcacaccatcacggcc
caggaaggcgtggacctgattgagaacaagcgcaaaaccgacgcggagcgcctcatcaag
tcgtttgccgaaaaccccgacgtgcaggtgcttaacggtcgtttcggaccctatatcgtg
gctggcaagaagaacgtgaagattccgaagggcgaggagcccgccgacctcacgctggaa
cgctgcctggagctggccgacgctacgcccgacaaaccggccaaaggcggccgtttcgcc
aagaaggccgcgcccgccgagaagacggaaaaagccgatacgccggccaagaagccagcc
gctaagaaagccgccactaaaaagccggcggcaaaaaaagcaaccggcaccacgggtgct
aaaaaagctgcgcccaaagcggccccaaaggccaagtaa
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