Hymenobacter swuensis: Hsw_3316
Help
Entry
Hsw_3316 CDS
T03055
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw00260
Glycine, serine and threonine metabolism
hsw00270
Cysteine and methionine metabolism
hsw00450
Selenocompound metabolism
hsw00670
One carbon pool by folate
hsw01100
Metabolic pathways
hsw01110
Biosynthesis of secondary metabolites
hsw01230
Biosynthesis of amino acids
Module
hsw_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Hsw_3316
00270 Cysteine and methionine metabolism
Hsw_3316
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Hsw_3316
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Hsw_3316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsw04147
]
Hsw_3316
Enzymes [BR:
hsw01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
Hsw_3316
Exosome [BR:
hsw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Hsw_3316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Met_gamma_lyase
Alliinase_C
Motif
Other DBs
NCBI-ProteinID:
AHJ98911
UniProt:
W8F8I3
LinkDB
All DBs
Position
complement(3769898..3771037)
Genome browser
AA seq
379 aa
AA seq
DB search
MKFGTKAIHAGVHPDPETGAIMTPIYQTSTYVQRSPGDHKGFEYSRTHNPTRTQLQDALA
ALDGGKHGLAFASGMAAIDCIVKLLQPGDEVISTNDLYGGSYRLFTKVYATYGIKFHFVP
MHDMTAVEAAVTERTKLIWVETPTNPLLNIIDIAAASAVAKKAGALLVVDNTFSTPYLQT
PLELGADMVMYSLTKYMAGHSDTVMGAVVVNDDELHQRLSFYQNACGGTPGPQDCFLVLR
GLKTLHVRMQRHCENGRKVAEYLKAHPKVEKVYWPGFEDHPNHAVAAQQMRDFGGMISFV
LKGDRKKDAIACLEKFQLFSLAESLGGVESLSGHPATMTHASIPAEERRKAGLSDSLIRL
SVGIEDVEDLIDDLQQAIG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggaaccaaagccatccacgccggtgtgcatcccgaccccgaaaccggggcc
atcatgacgcccatctaccagacctcaacctatgtgcaacgctcccccggcgaccataaa
ggcttcgagtactcgcgcacacacaaccccacccgcacccagctgcaggatgcgttggca
gctctcgacggaggcaagcacggcctggcatttgcctcgggcatggcggccatcgactgc
atcgtgaagttgctgcagcccggcgacgaggttatcagcactaacgacctgtacggcggc
tcttaccggctctttaccaaggtgtacgccacctacggcatcaaattccacttcgtgccc
atgcacgacatgacggcggtggaagcggccgtgaccgagcgtaccaagctgatttgggtg
gaaacgcccaccaacccgctgctcaacatcattgacattgccgccgcctcggccgtggcc
aagaaggccggggccctactggtggtggataacacgttcagcacgccctacctgcaaact
ccattggagctgggcgccgatatggtgatgtactcgctgaccaaatacatggctggccac
tccgatacggtaatgggtgccgtggtggtgaatgacgacgaattgcaccagcgtctgagc
ttctaccagaacgcctgcggtggcacccctggcccccaggactgctttctggtgctgcgt
ggccttaaaacactgcacgtgcgtatgcagcgccactgcgaaaacggccgcaaagtggcc
gagtacctcaaggcgcatcccaaagtggagaaagtgtattggcccggtttcgaggaccac
cccaaccacgccgtggccgctcagcagatgcgcgacttcggcggcatgatttccttcgtg
ttgaaaggtgaccggaagaaggatgccattgcctgcctcgagaaattccagctgttctcc
ctggctgaaagcctgggcggcgtggaaagcctctcgggccaccccgccaccatgacgcac
gccagcatcccggccgaggagcgccgcaaagccggtttatccgactcgctgatccgtctg
agcgtgggcattgaggatgtagaggacctgattgacgatttgcagcaggccatcggctaa
DBGET
integrated database retrieval system