Hymenobacter swuensis: Hsw_3940
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Entry
Hsw_3940 CDS
T03055
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsw03000
]
Hsw_3940
Transcription factors [BR:
hsw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Hsw_3940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_Tnp_ISL3
HTH_Tnp_1
HTH_IclR
HTH_10
HTH_38
Zn_ribbon_InsA
HTH_23
HTH_5
HTH_31
HTH_7
HTH_35
HTH_24
HTH_28
Fe_dep_repress
Cro
HTH_26
MarR_2
MerR
HTH_1
Sigma54_DBD
HTH_Crp_2
TetR_N
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AHJ99535
UniProt:
W8FCX4
LinkDB
All DBs
Position
4469019..4470212
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AA seq
397 aa
AA seq
DB search
MIKCTKCHLADSVMRAGFIRGRQRYHCKACNYHFTDDKGVVVPEKKRRQTTISDVARELG
VAPSTVSRALNGHSDININTRRAIMEVARQLDYQPNLLAQSLKSSETKTIGVVIPDIERP
FFATAVSGIQQVVGEAGYRVMICQSKESYEIEVSNVQALIGSRVDGLLICHSRETENFDH
VKPAATRGIPIVHFDRVCNEVDSAKVILDDWNGAFNVTEHLIEQGARHIAILAGPEGLLI
SQSRLAGYRSALLKHGLPLRNELRAHINFRPESAVAALDAWLALPEPPDAIFAVNYTNAF
DLLVALKARHIRVPEDVAVVGFGDEFMASMIEPGLTTVNLHPYRIGQQAARLFLEQVQQK
EAFQPRTFVITGDLVIRQSSLKGKSQLAHAEFFKLDI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatgcaccaaatgccatctggccgattcggtcatgcgggcgggcttcatccgg
gggcgacagcgctaccactgcaaggcctgcaactaccatttcaccgacgacaagggcgtg
gtagtgccggaaaagaaacggcggcaaaccaccatcagcgacgtggcgcgggagctgggc
gtggctccttccaccgtatcgagggcgctcaatggccattccgatatcaacatcaacacc
cgccgggccattatggaggtggcgcgccagcttgattaccagcccaacctgttggcccag
agcctgaaaagcagcgagaccaagaccatcggggtggtaatcccggacattgaacggccg
ttttttgccaccgccgtcagcggcattcagcaggtggtgggcgaggccggctaccgggtg
atgatctgccagtcaaaggagtcctacgaaattgaagtcagcaacgtgcaggccctcatc
gggagccgcgtggatgggctgctgatctgtcactcgcgagaaaccgagaatttcgaccac
gtaaaaccggccgccacgcgcggcattcccattgtacactttgatcgggtgtgcaatgaa
gtggattcggccaaggtgattctcgacgactggaacggggccttcaacgtgaccgaacac
ctcattgagcagggtgcgcgccacattgctattctggccggtcccgaagggctgctcatc
agccagagccggctggcgggctaccggagcgccttgctcaagcatgggctgccgctgcgt
aacgaactgcgcgcccacatcaacttccggcccgaatcggcggtggcggccttggatgcc
tggctggccttacccgagccgcccgacgccattttcgccgtcaactacaccaacgccttc
gatctgctggtggccctgaaagcccgccacatccgggtgcccgaggacgtggccgtggtt
ggtttcggcgacgagttcatggcttcgatgattgagcccggcctgactaccgtgaacctg
cacccctaccgcatcgggcagcaggcggcgcggctgtttctggagcaggtgcagcagaag
gaggccttccagccccgcaccttcgtcatcaccggcgacttggtcatccgccagtcgtct
ttgaaaggcaaatcccagcttgcccacgccgagtttttcaagctggatatctga
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