Hymenobacter swuensis: Hsw_3965
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Entry
Hsw_3965 CDS
T03055
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw00730
Thiamine metabolism
hsw01100
Metabolic pathways
hsw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Hsw_3965
Enzymes [BR:
hsw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Hsw_3965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHJ99560
UniProt:
W8FCZ2
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All DBs
Position
4493669..4495546
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AA seq
625 aa
AA seq
DB search
MKTKDHAPHQTLVERQPLTGSRKVYVPGQLYPNIRVAMREIGLADSKRHLDFVNPTEPNP
AVTVYDTSGPYTDPTVEIDLKKGLPRLREAWVLERADVEELPGISSDYGQQRAADAALDH
LRFEHIRRPYRAKEGQNVTQLHYARQGIITPEMEYIAIRENQRIDQMAAQDALRVQHAGH
SFGANTPQEHITPEFVRAEVAAGRAVIPSNINHPEAEPMIIGRNFLVKINTNIGNSAVTS
SIEEEVDKAVWSCRWGGDTLMDLSTGKNIHETREWIIRNCPVPVGTVPIYQALEKVNGKA
EDLTWELFRDTLIEQAEQGVDYFTIHAGVRLSYIPLTAKRVTGIVSRGGSIMAKWCLAHH
QENFLYTHFAEICAIMRAYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKLAWQHD
VQVMIEGPGHVPMHLIKQNMDKQLKECHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGW
FGTAMLCYVTPKEHLGLPNKQDVKDGVIAYKIAAHAADLAKGHPGAQYRDNALSKARFEF
RWQDQFNLSLDPDTARAYHDETLPAEGAKVAHFCSMCGPHFCSMKITQEVRDFAATQQVQ
PDEALAHGLAEKAREFVAKGSEIYL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaagaccacgccccgcaccagacgctggtggagcgccagcccctcacgggc
tcccgcaaagtgtacgtacccggccagctgtaccccaacatccgggtggctatgcgcgaa
atcggcttggctgacagcaagcggcacctcgacttcgtgaaccccaccgagcccaacccg
gccgtgacggtgtacgacaccagcggcccttacaccgaccccaccgttgaaatcgacctg
aaaaaaggcctgccacggctgcgcgaggcctgggtgctggagcgcgccgacgtggaggag
ctgccgggcatttcgtcggactacgggcagcagcgggccgccgatgccgcgctggaccac
ctgcgcttcgagcacatccggcggccgtatcgggccaaggaagggcagaacgtgacccag
ctgcactacgcccgccagggtatcatcacaccggagatggagtacattgccatccgcgaa
aaccagcgcatcgaccagatggccgctcaggatgcgctgcgggtgcagcatgcgggccac
agcttcggggccaacacgccacaggagcacatcacgccggagtttgtgcgggctgaagtg
gccgccggccgggccgtgattccctccaacatcaaccaccccgaggccgagcccatgatt
atcgggcgcaacttcctggtgaaaatcaacaccaacatcggcaactcggccgtcacgtcg
agcattgaggaggaggtggacaaggccgtgtggagctgccgctggggcggcgacacgctg
atggacctgagcacgggcaagaacatccacgaaacgcgggagtggattatccgcaactgc
ccggtgccggtgggcacggtgcccatttaccaggccctggagaaggtgaacggcaaggcc
gaggacctgacctgggagctgttccgcgacacgctcatcgagcaggccgagcagggcgtg
gactacttcaccatccacgccggcgtgcgcctcagctacattccgctcacggcgaagcgc
gtgacgggcattgtgtcgcggggcggctcgattatggccaagtggtgtctggcgcatcat
caggaaaacttcctctacacccattttgccgaaatctgcgcgattatgagagcctacgac
gtggccttctcgctgggcgacgggctgcggcccggctccattgccgacgccaacgacgcg
gcccagtttgccgagttggaaaccctgggcgagctgaccaaactagcctggcagcacgac
gtgcaggtgatgatagaaggccccggccacgtgccaatgcacttgatcaagcagaacatg
gacaagcagttgaaggagtgtcacgaggcccccttctacaccctgggcccgctcaccacc
gacattgcgcccggctacgaccacatcacctcggccatcggggcggccatgattggctgg
tttggcacggccatgctctgctacgtgacgcctaaggagcacctaggcctgcccaacaag
caggacgtgaaggacggcgtcattgcctacaaaattgccgcccacgccgccgacctagcc
aagggccacccgggcgcgcagtaccgcgacaacgccctaagcaaggcccgcttcgagttc
cgctggcaggaccagttcaacctgagcctcgaccccgacaccgcccgcgcctaccacgat
gagacgttgcccgccgagggcgccaaggtggcccacttctgctctatgtgcggcccccat
ttctgctccatgaaaatcacccaggaagtacgcgacttcgccgccacccaacaagtacag
cccgacgaagccctggcccacggcctggccgaaaaagcccgggagttcgtggccaagggc
agtgaaatctatctgtaa
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