Hymenobacter swuensis: Hsw_4228
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Entry
Hsw_4228 CDS
T03055
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hsw
Hymenobacter swuensis
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsw03016
]
Hsw_4228
03036 Chromosome and associated proteins [BR:
hsw03036
]
Hsw_4228
Transfer RNA biogenesis [BR:
hsw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Hsw_4228
Prokaryotic type
Hsw_4228
Chromosome and associated proteins [BR:
hsw03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Hsw_4228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
DAO
HI0933_like
UDPG_MGDP_dh_N
NAD_binding_8
Lycopene_cycl
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AHJ99823
UniProt:
W8F4C1
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All DBs
Position
4806302..4808170
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AA seq
622 aa
AA seq
DB search
MFQQEEYDVIVVGAGHAGCEAAAAAANMGSKVLLVTMNMNTIAQMSCNPAMGGVAKGQIV
REVDALGGQSGLITDKTMIQFRMLNRSKGPAMWSPRAQSDRMRFAEEWRMTLEQTPNVDF
WQEAVMGLVVEEGACVGVKTQLGIEFRGKSVVLTNGTFLNGLIHIGEKQFGGGRAAEKGS
TGITEQLIELGFEAGRMKTGTPPRVDGRSLDYSKMEEQAGDAEPSKFSYLDTPALRNQRP
CYITYTNPEVHEILKEGFEKSPMFQGRIKGLGPRYCPSVEDKINRFADKDRHQIFVEPEG
WSTVEVYVNGFSSSLPEDVQYRALRKIAGFENAKMFRPGYAIEYDFFPPTQLQLTLETKL
IQNLYFAGQINGTTGYEEAACQGLMAGINAHNKVHGKAPFVLKRSEAYIGVLIDDLVNKG
TDEPYRMFTSRAEHRLLLRQDNADLRLTPLGYELGLASEERMQLVREKEQQTKEVAKLLK
NFGIEAADINPWLTEIGSAVISEKTRAVNLLRRPGIDLPALARVLPELTLALAPYRPDAL
EQAEILVKYEAYLEKEHQQAARVQELENFVIQGRLDYTAMPALSHEAREKLLKIQPETLG
QASRISGVSPADVSVLMVYLGR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcaagaagaatacgatgtcattgtagtaggagccgggcatgccggctgcgag
gccgccgccgcggctgccaacatgggctccaaagtcctgctggtgacgatgaacatgaac
accatcgcgcagatgtcgtgcaacccggccatgggcggggtggccaagggccagattgtg
cgcgaggtggacgcgctgggcggccagtcgggcctcatcaccgacaaaaccatgattcag
ttccggatgctgaaccgctccaaaggccccgccatgtggagcccccgggcgcagagtgac
cggatgcggtttgctgaggagtggcgcatgacgctggagcaaacccccaacgtggatttc
tggcaggaagccgtcatgggcctcgtggtggaagagggcgcgtgtgtgggcgtgaaaacc
cagctcggcatcgagttccggggcaagtcggtggtactcaccaacggcacgttcctcaac
ggcctcatccacatcggggagaagcagtttggcggtggccgggcggccgagaaagggagt
accggcatcacggagcagctgattgagctgggctttgaggccggccgcatgaaaaccggc
accccgccccgcgtggacggccgctcgctcgactacagcaaaatggaggagcaggccggc
gacgccgagcccagcaaattcagctacctcgacacgcccgccctgcgcaaccagcgcccg
tgctacatcacctacaccaacccagaggtgcacgaaatcctgaaggagggcttcgagaag
tcgccgatgttccagggccgcatcaagggcctggggccgcgctactgcccgtcggtggag
gacaaaatcaaccgcttcgccgacaaggaccgccaccagatttttgtagaaccggaaggt
tggtccacggtggaagtgtacgtgaacggctttagctcttcgttgcccgaggacgtgcag
taccgcgccctgcgcaaaattgccggcttcgagaatgccaagatgttccggcccggctac
gccattgagtacgacttcttcccgccgacccagctccagctcaccctggaaaccaagctg
atccagaacctctacttcgcgggccagatcaacggcaccacgggctacgaggaggccgcc
tgccagggcctgatggccggcatcaacgcccacaacaaggtgcacggcaaagcgcccttc
gtgctcaagcgcagcgaggcctacattggcgtgctcatcgacgaccttgtgaacaagggc
accgacgagccctaccgcatgttcacgagccgcgccgagcaccgcctgctgctgcgccag
gacaacgccgacctgcgcctcacgcccctgggctacgagctggggctggcttcggaggag
cgcatgcagctggtgcgcgaaaaggagcagcagaccaaggaagttgccaagctgctgaag
aacttcggcatcgaggctgcggacatcaacccctggctcacggaaatcgggtcggccgtt
atcagcgagaaaacccgcgccgtgaacctactgcgccgtcccggcatcgacctgccggcc
ctagcccgtgtgctgcccgaactcaccctggccctggccccgtaccgccccgacgcgctg
gagcaggccgaaattctggtgaagtacgaggcttacctggagaaggagcaccaacaggcc
gcccgcgtgcaggagctggaaaacttcgtgattcagggccgcctcgattacaccgccatg
cccgccctctcgcacgaagcccgcgagaagctgctcaagattcagcccgaaaccctgggc
caggccagccgcatcagcggcgtgagccccgccgacgtgtcagtgttgatggtgtatttg
gggcgttaa
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