Hymenobacter swuensis: Hsw_PA0192
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Entry
Hsw_PA0192 CDS
T03055
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hsw
Hymenobacter swuensis
Pathway
hsw03420
Nucleotide excision repair
hsw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hsw_PA0192
03430 Mismatch repair
Hsw_PA0192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsw03400
]
Hsw_PA0192
Enzymes [BR:
hsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hsw_PA0192
DNA repair and recombination proteins [BR:
hsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hsw_PA0192
MMR (mismatch excision repair)
Other MMR factors
Hsw_PA0192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Helicase_C
UvrD_C_2
Cas3-like_C_2
DEAD
AAA_30
AAA_22
Helicase_RecD
AAA_11
ResIII
AAA_16
Stonustoxin_helical
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AHJ95525
UniProt:
W8F132
LinkDB
All DBs
Position
pHsw1:complement(193113..197021)
Genome browser
AA seq
1302 aa
AA seq
DB search
MKLLGDLGTNPVQAHITLRFKPVASKEQQLIALLDDLREQKFDHKLSRVLVFVRTRRQAE
EVTEQLKTQAEELGLEWAQQVDFFHAGLDGTDRAEKYEAYKPVRKAASVAEGAEDAKTAV
LVATKAFGMGMDIGNIHYLYHLGPSSTFEDFLQEVGRAGRDAGMRQQANFGEGRPIRAMC
VATREDFGKLRDLQHRSDLTWDYLGQVQQLVHRYIERFRPLEPRPNEAFPLPLDLAEEMS
DDDAGGGEATKFRLGLHWLEQLGRIRLGLYTPAHLPILLCDKPNYGKIKDQTERQEVEQF
VTRLRASPYCEGASLLLPMAELMTLSGKRRWTELYRLLFQAQKAGAICIERYLTLELTDL
RRAELTAWREEHRCAAGKLPLVEAVFGLARHLMERVRPGEQLTIDGDELDRMVASEAAEH
FQSRQIYWEDADRNKRKLTPTATQQKLIKDWHKKRAKFGLKLIRLLPRTRVESVLNRHDR
SQARVVQLIYNGNQDAKQWQQPLAELKRQLTKLIAHVVETGHTRFNYADLVVELGLENAA
HDYLDNLLFLARALGYLKGSGSLVPMGIELFLDDLSVPNKDDRASADYQRYLDFEEGIRL
KELRLMALQCLANLKSTERQDTFIKRYFQCESGELLLKLLEEYLPENHPSLAAFQKEALV
KAEKGLSEEQRIVYDAPLTDNLQVIAGPGSGKTHTLTLRVARLVQKAKVPPEQILVLAYN
RAVVVELKDRLSKLFRALGYGRLIQRLHIHTFHSLCRRCMGAALDDKEFDEWVPAFVQAL
ERDPGLLSRELGRIRYVFVDEFQDITELRLQLLKLLAPNTGPDGVRLCVIGDPNQSIYGY
ERIKEGGAIDPHPYYVQFHRQYEPQTLFLSNNYRSYPGILQAAARVLATNEVRFKRMPEL
QAVRTPSHERPYCQVLRYRDSKTDWRAKLNELLGEVYEPGKPYQQVAVMLRSNDEVFRVF
NELRSSTLPSDVSLRIQGASMAPVATREFYHLLHTFRAEPAAPLSATYLDDFNTRKQAAL
RKFEHVWDPYLMHLLHCLLYEFNKERPEEGTNQDVLDFVEEMARRDDGHFAKLYDSHIET
VAPGQRRREVVLTTMHKVKGLEFDAVLLPPGFTDFGLDKRTGKAAANLVELVEEERRLLY
VAYTRARYRLVVINYDREEAVATGKPYALEGAEQKLGRILKPGLDKLFISWGGSNPNAYE
FIQGRVKIGDPITLTRDAYGRWLIYCHGTLVGRLRGGQFKPEPQAARLEGLAVAGVVCYT
HEESLRYDTAHNSTFTTDNWHPPAVKRGHIYLVDFAGYYKAD
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactaggtgacttaggcactaaccccgtgcaagcgcacattaccttgcgcttt
aagccggtagctagtaaagagcagcagttaatagcgttgcttgatgacttgcgggagcaa
aaatttgatcacaagctgagccgggtgctggtatttgtacggacccgcaggcaagccgaa
gaagtgacagagcagcttaaaacccaagcagaggagctggggttggagtgggcgcagcag
gtagatttttttcatgccggacttgatggaactgaccgagctgaaaaatatgaagcctac
aagccagtcaggaaggcagcatccgttgctgaaggtgctgaagatgctaagacggcggta
ctggtcgcgaccaaagccttcggcatgggcatggatattggcaacatccattacctgtat
catttgggcccatcttcaaccttcgaggactttttgcaagaagtaggacgagcagggcgc
gacgcggggatgcgccaacaagcaaattttggggaaggacgccccattagggcaatgtgc
gtggctacgcgcgaagacttcggcaagctgcgcgacttgcagcaccgctcggatttgacc
tgggattatttaggacaggtacagcaattagtgcacaggtacatcgagaggtttcggccg
ctggaaccgcgtcccaatgaagcctttccactccctttggatttggctgaagagatgagc
gatgacgacgctgggggtggggaagccactaagttccggctggggttgcactggctcgaa
caactggggcgcatccgcttggggctctatacccccgcccacttaccaatattgctctgc
gacaagcccaactatggaaaaatcaaggaccaaactgaacggcaggaggtagaacagttt
gtgacacggctacgtgcctcaccctactgtgagggagcgtcgctattgctgccaatggct
gagctcatgacgctctccggtaaacggcgatggacagagctttaccggctactttttcaa
gcacaaaaagccggcgcaatttgtatagagcgatacctgacacttgagctaactgactta
cgccgcgcagaacttactgcgtggcgagaagagcataggtgtgcagcaggcaagttgccc
ttggtggaagcagtgtttggattggcccggcacctaatggaaagagtacgtccgggcgag
cagctaaccatagatggagacgagcttgaccgaatggtagcttctgaggcagctgagcat
ttccagtcacggcaaatctactgggaagatgctgaccgaaacaagcggaagttgacccca
acggcgacgcaacagaagttaataaaggactggcataaaaagcgggcgaagtttgggctc
aagcttattcgacttttaccccgcacccgggtggaatctgtgttgaaccgccatgaccgt
agccaggcacgagtggtgcaacttatttacaatgggaatcaggatgctaagcagtggcag
cagccgctggcggaattaaaacggcagcttactaagctgatagcccatgtagtagaaacc
gggcatacccggtttaattatgccgacctggtggtggagcttggtctggaaaacgccgcg
catgactaccttgacaatcttttgtttctagcacgcgcacttggctaccttaaaggaagt
ggctcgttggtgccgatgggcattgagctatttttggatgatttatcggtgccgaataag
gatgaccgagcatcagcagattatcaaagataccttgattttgaggagggcattcggcta
aaagaactgcgtttaatggccttgcaatgcttggctaacttgaaaagtaccgaacgtcag
gacacctttatcaagcgttattttcagtgtgagagcggcgagctcctactaaaactactc
gaagaatatctgcccgaaaaccaccctagccttgctgcatttcagaaggaagcattagtg
aaagcggaaaaaggcttgagcgaggaacagcggattgtatacgatgcaccgcttactgat
aacctgcaggtaatagccgggccaggaagcggtaaaacccatacgctgaccctgcgagtg
gcacgcctagtgcagaaagcgaaagtgccgccagaacaaattctggtgctcgcctacaat
cgggcggtagtggttgaattgaaggacaggctaagcaaactgtttcgggcacttggctat
gggcggctaatacaacggctgcatattcacacgttccatagtctctgccgacgttgcatg
ggggcagccctcgatgacaaggaattcgatgagtgggtaccagccttcgtgcaagctctg
gaaagagaccctggcttgctgtcgcgggaactgggccgaattcggtacgttttcgtggat
gagtttcaggatattactgagctccgactacagctgctaaaactgctggcccctaataca
ggaccagacggtgtgcgactttgcgtgattggggaccccaatcagagcatttatggctac
gaacgtataaaagaaggtggggctatcgaccctcacccctactacgtgcagtttcatcgc
caatatgagccgcagactctgtttctgagcaataattaccgctcatacccaggcatacta
caagccgcggcccgcgtattggcgactaatgaggttcggtttaaacgtatgcctgagctg
caggctgtacgaacaccgagccatgaacgaccatattgccaggtgttgcggtaccgtgac
agcaagaccgattggcgggccaagctcaatgaattattgggcgaggtatacgaacccgga
aagccttaccagcaggtggcagtaatgctgcgctccaatgacgaagtatttcgggttttc
aatgaactgcgctcctcgacacttccgtcagacgtgtcattgcgcattcaaggggcatca
atggcgcccgtcgcgacaagagaattttaccacttgctacatacgtttcgggcagagcca
gcagctccgcttagtgccacttacctcgacgattttaatacccgtaagcaagcagcgttg
cgcaagttcgagcacgtatgggacccgtatttaatgcatctattgcattgcctactttac
gagttcaataaggagcgccccgaagaaggcacaaaccaggatgttctagactttgtggaa
gaaatggctaggcgggacgatggccattttgccaagctctatgatagccacattgaaact
gtagcaccagggcagaggcggcgtgaggtggtcttgaccactatgcacaaggttaagggc
ctagagttcgatgctgtgctgctaccacctggcttcactgattttggcctagataagcgt
actggtaaagctgccgctaacctagtagagctggtggaagaagaacgacgccttctatat
gtggcttacacacgggctcgctaccgacttgttgttatcaattatgaccgcgaagaggcg
gtggccaccggcaagccatatgccttggagggcgctgagcagaagctgggacgcatcctt
aaaccggggctcgataagctatttatctcctggggtggcagtaaccccaatgcctatgag
tttattcaaggcagggttaaaataggtgacccaataaccttaactcgggatgcttatggg
cggtggctaatatactgccatggtacgctggtaggccgtttgcgcggaggacaattcaag
ccagagcctcaagctgcgcggcttgaggggctagctgtggccggagtggtgtgctacacg
catgaagagtctctgcgctacgatacggcgcacaattcaacgtttacaaccgacaactgg
catccacctgcggtgaaacgcggtcatatttaccttgtagattttgcgggctattacaaa
gcggattaa
DBGET
integrated database retrieval system
