Billgrantia sulfidoxydans: HNO51_02575
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Entry
HNO51_02575 CDS
T08035
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hsx
Billgrantia sulfidoxydans
Pathway
hsx03030
DNA replication
hsx03430
Mismatch repair
hsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNO51_02575 (dnaE)
03430 Mismatch repair
HNO51_02575 (dnaE)
03440 Homologous recombination
HNO51_02575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsx03032
]
HNO51_02575 (dnaE)
03400 DNA repair and recombination proteins [BR:
hsx03400
]
HNO51_02575 (dnaE)
Enzymes [BR:
hsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNO51_02575 (dnaE)
DNA replication proteins [BR:
hsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNO51_02575 (dnaE)
DNA repair and recombination proteins [BR:
hsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNO51_02575 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
QTP53661
UniProt:
A0ABX7VZD1
LinkDB
All DBs
Position
539753..543256
Genome browser
AA seq
1167 aa
AA seq
DB search
MTTPFVHLRVHTEYSLVDGLVRLKPLLKATAEQGMPALAVTDESNLFGLVKFYRGAQGSG
LKPVIGADLWLANPHDETHPYRLTLLAMNDTGYRNLTELISRGWMQGQRQGRAVLEKAWV
LEQSEGLIALSGGREGEIGRHLLADHRDEARALLEEWQAAFPERFYLELTRTGRPLEEEC
VHLSVELAMASGTPVVATNDVRFLERDDFWAHETRVSIGEGKALDDPRRERKYTEEQYLK
SPAEMAELFADIPEALENSVMIAARCNVDVRLGEIFLPEFEIPEGMTQDEFFRKVSHDGL
TERLDFLYPAEKYPRDGAEFAEIDKRYRERLDFELDIIIQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IEYVADRYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLAKA
IEAEPALKEFVENDEEAAEIWEMAVKLEGITRGTGKHAGGVVIAPTKLTDFSPLLCDEEG
NGLVVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALEMVDKVRAVKGQGPLDIDSIPLDDG
PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEISYPHPDYQHEWLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGQADMLRRAMGK
KKPEEMAKQRSGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL
KTHYPGPFMAAVMSTEMDNLDKVVPLIEESRRIGLTVTPPDVNIGAYKFTVDTEGRVVYG
LGAIRGVGEGPIGAIVEAREADGPFTDLFDFCRRVDPKRMNKRTLEALIRSGALDNLGPS
RAVLAAALDDAIRAAAQTQTNQSLGMLDMFGEAFADDEAESDPYEAYRSAREWTDKERLA
GEKETLGLYLTGHPIDEYEKELARFVSTRISDLKPSREPQRVAGLVVALRTMKSKRGDTM
AFVTLDDRTGRIEASLFGELYDQLRGQIEADQVLIVEGEVSSDDFSGGLRLRGKEITPMV
AARARYGEAVELSLDGTRVNGRLVESLRESLVPHRDDGGLPVRLRYRNDAAAGWLELDAQ
WRVAPSDELLIALREVEGQDGVRLKYR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcctttcgttcatctccgcgtgcacaccgaatattccctggtcgacggcctg
gtgcggctcaagccgctgctcaaggccaccgccgagcagggcatgccggcgctggccgtg
accgacgaatccaacctgttcggtctggtcaagttctatcgcggtgcccagggcagcggc
ctcaagccggtgatcggcgccgacctgtggctggccaatccccacgacgagacgcacccc
taccggctgacgctgctggcgatgaacgacaccggctatcgcaacctcaccgagctgatc
tcgcggggctggatgcagggacagcgccaggggcgcgcggtgctggagaaggcctgggtg
ctcgagcagagcgagggcctgatcgcgctgtccggcggccgtgagggcgagatcggccgc
cacctgctcgccgatcaccgcgatgaggcgcgcgcgctactggaggagtggcaggcggcc
ttcccggagcgcttctacctggagctgacccgcaccgggcgaccgctggaggaggagtgc
gtgcacctctcggtggaactcgccatggcctcgggcacgccggtggtggccaccaacgac
gtgcgcttcctcgagcgcgacgacttctgggcccacgagacccgggtctccatcggcgag
ggcaaggcgctggacgacccgcgccgcgagcgcaagtacaccgaggagcagtacctcaag
agcccggcggagatggccgagctgttcgccgacattcccgaggcgctggagaacagcgtg
atgatcgccgcgcgctgcaacgtcgacgtgcgcctgggcgagatcttcctgccggagttc
gagattcccgagggcatgacccaggatgagtttttccgcaaggtctcccacgacggcctc
accgagcgcctcgactttctctacccggccgagaagtatccgcgcgacggcgccgagttc
gccgagatcgacaagcgctatcgcgagcggctggacttcgagctcgacatcatcatccag
atgggctttcccggctacttcctgatcgtgatggacttcatccagtgggccaaggacaac
gacgtgccggtggggccggggcgcggctccggggccggctcgctggtggcctatgcgcag
aagatcaccgacctcgacccgctggagtacgacctgctgttcgagcgcttcttgaacccc
gagcgggtctcgatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtg
atcgagtacgtggccgaccgttatggccgcaatgcggtgtcgcagatcgtcaccttcggc
accatggcggccaaggcggtggtacgcgacgtggcccgcgcccagggcaagccctattcg
ctcggcgacaagctctccaagctgattcccttcgaggtgggcatgaccctggccaaggcc
atcgaagcggagccggcgctcaaggagttcgtcgagaatgacgaggaggccgccgagatc
tgggagatggcggtcaagctcgagggcatcacccgcggcaccggcaagcacgccggcggc
gtggtgatcgcgccgaccaagctgaccgacttctcgccgctgctgtgcgacgaggagggc
aacggcctggtcgtgcagttcgacaagaacgacatcgaggaggccgggctggtcaagttc
gacttcctcgggctgcgtaccctgaccatcatcgactgggcgctggagatggtcgacaag
gtgcgggcggtcaagggccaaggaccgctcgacatcgacagcatcccgctcgatgacggt
cccaccttcgagatgctcaagcgcgccgagaccacggcggtgttccagctcgaatcgcgc
ggcatgaaggagctgatcaagcgcctgctgcccgattcgctggaggacatgatcgcgctg
gtggcgctgttccgtcccgggccgctgcagtcgggcatggtcgacgacttcatcaaccgc
aagcacggtcgcgccgagatctcctacccccacccggactaccagcacgagtggctcaag
ccggtgctcgagcccacctacggcatcatcctctaccaggagcaggtgatgcagatcgcc
caggtgctggccggttacaccctgggccaggccgacatgctgcgccgggcgatgggcaag
aagaagcccgaggagatggccaagcagcgcagcggcttcatggagggctgcgccgccaac
ggcatcgacaaggagctggccggcaacatcttcgacctggtggagaagttcgccggctac
ggcttcaacaagtcgcactcggcggcctacggcctggtctcctaccagaccgcctggctc
aagacgcactacccgggcccgttcatggccgcggtgatgtccaccgagatggacaacctc
gacaaggtggtaccgctgatcgaggagtcgcggcgcatcggcctgaccgtgacgccgccg
gacgtcaacatcggcgcctacaagttcaccgtcgataccgagggccgcgtggtctacggc
ctgggtgccattcgtggcgtaggcgaagggcccatcggcgccatcgtcgaggcccgcgag
gccgacggcccgttcaccgacctgttcgacttctgccgccgggtcgatcccaaacgcatg
aacaagcgcaccctggaggcgctgatccgctcgggcgcgctggacaacctggggccgagc
cgggcggtgctggccgcggcactggacgacgccatccgcgccgccgcccagacccagacc
aaccagagcctcggcatgttggacatgttcggcgaggccttcgccgacgacgaggccgag
agcgacccctacgaggcctatcgcagcgcccgcgagtggaccgacaaggagcgtctggcc
ggcgagaaggagaccctggggctctacctcaccggccaccccatcgacgagtacgagaag
gagctcgcccgcttcgtctccacccgcatcagcgatctcaagccctcacgggagccgcag
cgcgtcgccggcctggtggtggcgttgcgcaccatgaagtccaagcgcggcgacaccatg
gccttcgtcaccctggacgaccgcaccggacgcatcgaggcgtcgctgttcggcgagctc
tacgaccagctgcgtggccagatcgaggccgaccaggtgctgatcgtcgagggcgaggtc
tccagcgacgacttctccggcggcctgcgcctgcgcggcaaggagatcacgccgatggtg
gcggcccgcgcccgctacggcgaggcggtggagctgtcgctcgacggcacccgggtcaac
gggaggctggtggagagcctgcgcgagagcctcgtgccgcaccgcgacgatggcggcctg
ccggtgcgcctgcgctaccgcaacgacgccgctgccggctggctggagctggacgcgcag
tggcgcgtggcccccagcgacgagctgctgatcgcgctgcgtgaggtggaggggcaagac
ggcgtgcggctgaagtaccgctag
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