Billgrantia sulfidoxydans: HNO51_07375
Help
Entry
HNO51_07375 CDS
T08035
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hsx
Billgrantia sulfidoxydans
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsx03019
]
HNO51_07375 (hrpA)
Enzymes [BR:
hsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HNO51_07375 (hrpA)
Messenger RNA biogenesis [BR:
hsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HNO51_07375 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
nSTAND3
AAA_19
nSTAND_NTPase5
T2SSE
AAA_25
NACHT
FtsK_SpoIIIE
PhoH
SRP54
Motif
Other DBs
NCBI-ProteinID:
QTP54514
UniProt:
A0ABX7W2D2
LinkDB
All DBs
Position
1574038..1578060
Genome browser
AA seq
1340 aa
AA seq
DB search
MSTATPAGHTDDKIELQRLEQALGEVMLRDREPLSRRLNGLARRLREGKPVDRGLAEVAR
DVERSAALAASRRARPVALNYPPELPVAERRDEILAALRKHQVVVVAGETGSGKTTQLPK
LCLELGLGRRGLIGHTQPRRLAARSVATRLAEELEVPLGEQVGYQVRFTDQTGDATLVKL
MTDGILLAETRHDPDLSRYEAIVIDEAHERSLNIDFLLGYLKRLLPRRPELKLIITSATI
DVARFAEHFALPGADGEPRPAPVVEVSGRTYPVEVRYRPLVREEEDEADRTLQEGILHAV
AEIEQTERDRRWFHGPRDILVFLPGEREIRETADTLRRADLKATEILPLYARLSNAEQNR
VFAPHAGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPVEPVSQASAD
QRKGRCGRVAEGVCIRLYDEEDFLSRPEFTDPEIRRTNLASVILSMLSLKLGDIEQFPFV
DPPDSRFIKDGFRLLFELGAVDEANRLTPVGRKLARLPIDPRLARMVLAGAEQGGLRDVL
VVVSALAVQDPRDRPAEKRQAADQAHRRWHDPDSDFVALLNLWQGFEAARDELSGNQLRR
WCKEHYLNYLRLREWHDTFRQLRQLLREMGIEVPAPLPEPAQDGEEHDRARQQARRQSAV
QLHKALLPGLLSHLGMLTENREYLGARNRKFVIHPGSGLAKKPPKWLMAFELVETTRLFA
RTVARIEPQWVEPAAGHLVKRSYSEPHWEMKRAQVVAKEQVTLFGLPIVSGRSVHYGPIA
PREARELFIRRALVEGDFRTRGEFFDYNRALVEEVEELEDRARKRDILVDEETLFAFYDE
RIPADIVNGKGFEAWRRKAEADDPDILKFDRAVLLAREAKEVTQAQYPDELLLGGVRYPL
DYRFEPGAPDDGVTLTVPAAMLPQLPRARLEWLVPGLLREKCIALLKSLPKAIRRQVVPI
PDWVDAALETLTPDDVPLTEALGEFLRRRTGVRVHPDDWRTDQLEPHLIMNVRVVDHEGR
PLGQGRDVRELERRFEAAAGEGARALAAEVSEAPDVTGLPESPLPQSRVTTQAGIRVEAY
PALVPEGEAFRVELFDHPGKAEQAHRRGVARLAMARLPDQVRSIQRLKELEACALLFTKV
GSKRELVDDVVEAVFARTVAASPLPRSAAELEARLEATRAELVPGAEALVATLKRSLEGH
LAVTKALKGNLNLALALVYSDLKAQMQRLVHPGFVNEAGEWLEEYPRYMEAALIRLEKAP
RERMRDQMHMQEVQDFEARLAARRESQRRGGHEDPELVEFGWWIEELRVSLFAQQLGTRM
PVSVKRLERRWMELVGQGQG
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgctacccccgctggacataccgatgacaagatcgagctgcagcgcctcgag
caggcgctgggcgaggtcatgttgcgcgatcgcgagcccctttcgcgcaggctgaacggc
ctggcgcggcgcctgcgcgagggcaagccggttgaccgcggcctggccgaggtggcgcgc
gacgtcgagcgttccgcggcgctggcggccagccgccgggcccggccggtggcgctgaac
tatcctcccgagctgccggtggcagagcgccgcgacgagatcctcgccgctctgcgcaag
caccaggtggtggtggtggccggcgagaccggctccggcaagaccacccagctgcccaag
ctgtgcctggagctgggcctcgggcggcgcggcctgatcggccacacccagccgcggcgg
ctggcggcgcgctcggtggccacgcgcctggccgaggagctcgaggtgccgctgggcgag
caggtgggctaccaggtgcgcttcaccgaccagaccggcgacgctaccctggtcaagctg
atgaccgacggcatcctgctggccgagacccgccacgacccggatctcagtcgctacgaa
gcgatcgtcatcgacgaggcccacgagcgcagcctcaacatcgacttcctgctcggctac
ctcaagcgcctgctgccgcgccggcccgagctcaagctgatcatcacctcggcgaccatc
gacgtggcgcgcttcgccgagcatttcgcgctgcccggcgccgacggcgaacccaggccc
gccccggtggtagaggtctcgggccgcacctacccggtcgaggtgcgctatcgtccgctg
gtgcgcgaggaagaggatgaggccgaccgcaccctgcaggagggcatcctccacgccgtg
gcggagatcgagcagaccgagcgcgacaggcgctggttccacggcccccgcgacatcctg
gtgttcctgcccggcgagcgcgagatccgcgagaccgcggacaccctgcggcgtgccgac
ctcaaggccaccgagatcctgccgctctatgcgcggctctccaacgccgagcagaaccgc
gtcttcgccccgcatgccgggcgtcgcatcgtgctggccaccaacgtcgccgagacctcg
ctcaccgtgcccggcattcgctacgtgatcgacccgggactggtgcgcatcagccgttac
agctaccgcgccaagatccagcgcctgccggtggagccggtcagccaggccagcgccgac
cagcgcaagggtcgctgcgggcgggtggccgagggggtgtgcatccgcctctacgacgag
gaggatttcctctcacgccccgaattcaccgaccccgagatccgacgcaccaacctggcg
tcggtgatcctgtcgatgctttccctcaagcttggcgacatcgagcagttccccttcgtc
gatccccccgactcgcgcttcatcaaggatggcttccgcctgctgttcgagctgggcgcg
gtggacgaggccaaccgcctgacgccggtaggacgcaagctcgcccggctgccgatcgat
ccgcgcctggcgcgcatggtgctggcgggcgccgagcagggcgggctgcgcgacgtgctg
gtggtggtctcggcgctggcggtgcaggacccgcgcgaccgcccggcggagaagcgccag
gccgccgaccaggcccatcgtcgctggcacgatccggactccgacttcgtcgcgctgctc
aacctgtggcagggcttcgaggctgcccgcgacgagctcagcggcaaccagctgcggcga
tggtgcaaggagcactacctcaactacctgcgcctgcgcgagtggcacgatacctttcgc
cagctgcgccagctgctgcgcgaaatggggatcgaggtgccggcaccgttgcccgagcca
gcgcaggacggggaagaacatgaccgggcccgccaacaggcgcgccgccagagtgccgtg
caattgcacaaggcgctgctgccgggcctgctctcgcatctgggcatgctcaccgagaac
cgagagtacctgggggcgcgcaaccgcaagttcgtcatccatcccggctcggggctggcc
aagaaaccacccaagtggctgatggccttcgagctggtggagaccacccggctgttcgcc
cggaccgtggccaggatcgagccgcagtgggtcgagcccgcggccgggcacctggtcaag
cgcagctacagcgagccgcactgggagatgaagcgtgcccaggtggtggccaaggagcag
gtcacgctgttcggcctgcccatcgtcagcgggcgcagcgtgcactacggccccatcgcc
ccgcgggaggcacgcgagctgttcatccgccgcgccctggtggagggcgattttcgcacc
cggggcgagttcttcgactacaatcgcgccctggtggaagaggtcgaagagctcgaggac
cgggcgcgcaagcgcgacatcctggtcgacgaggagacgctgttcgccttctacgatgag
cggattcccgccgacatcgtcaacggcaagggcttcgaggcatggcgcaggaaggccgaa
gccgacgatcccgatatcctcaagttcgaccgcgccgtgctgctggcgcgtgaagcgaag
gaggtcacccaggcccaataccccgacgagctgttgctcggcggagtgcgctatccgctc
gactatcgcttcgagcccggcgcgccggacgacggcgtgaccctgacggtgccggcggcg
atgctgccgcagctgccgcgggcacggctcgagtggttggtgccggggctgctgcgtgaa
aagtgcatcgccctgctcaagtcgttgccgaaggcgattcggcgccaggtggtgccgatt
cccgactgggtcgacgccgcgttggagacgctgacgcccgacgacgtaccgctcaccgag
gccctgggcgagttcctgcgtcgccgcaccggcgtgagggttcaccccgacgactggcgc
accgatcagctcgagccgcacctgatcatgaacgtccgcgtggttgaccacgagggccgg
ccgctgggccagggacgcgacgtgcgcgagctcgagcgccgcttcgaggcggcggcgggc
gagggcgcccgagcgctggccgccgaggtcagcgaggcgcccgacgtcaccggcctgccc
gaatcgccattgccccagtcgcgggtgacgacccaggcaggcatccgggtcgaggcgtat
ccggcattggtgcccgagggcgaggccttccgtgtcgagctgttcgaccaccccggcaag
gccgagcaagcgcaccgccgtggcgtggctcggctggccatggcccgcctgccggaccag
gtgcgcagcatccagcggctgaaggagctcgaggcgtgtgccctgctgttcaccaaggtg
ggcagcaagcgcgaactggtcgacgatgtggtcgaggcggtattcgcccgcaccgtggcg
gcgtcgccgctgccgcgctcggccgccgagctcgaggcgcgactcgaggcgacccgtgcc
gagctggtgccgggcgccgaggcgctcgtcgccacgctcaagcgctcgctcgaaggccat
ctggccgtgaccaaggcactaaagggcaacctcaacctggcactggccctggtatacagt
gatctcaaggcccagatgcagcggctggtacatcccggcttcgtgaacgaggcgggggag
tggctggaggagtacccgcgctacatggaggcggcactgatccggctggagaaggcgccg
cgcgagcgcatgcgcgaccagatgcacatgcaggaagtccaggatttcgaggcgcgcctg
gccgcacggcgcgagagccagcgccgcggtggtcacgaggatcccgagctggtggagttc
ggctggtggatcgaggagctgcgggtgtcgctgttcgcccagcagctcgggacccgcatg
ccggtatcggtcaagcgcctcgagcggcgctggatggagctggtggggcagggtcaaggc
tga
DBGET
integrated database retrieval system
