Billgrantia sulfidoxydans: HNO51_09160
Help
Entry
HNO51_09160 CDS
T08035
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsx
Billgrantia sulfidoxydans
Pathway
hsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNO51_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsx03019
]
HNO51_09160
03400 DNA repair and recombination proteins [BR:
hsx03400
]
HNO51_09160
Enzymes [BR:
hsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNO51_09160
Messenger RNA biogenesis [BR:
hsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNO51_09160
DNA repair and recombination proteins [BR:
hsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNO51_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
QTP54836
UniProt:
A0ABX7W4N8
LinkDB
All DBs
Position
complement(1963435..1965435)
Genome browser
AA seq
666 aa
AA seq
DB search
MIDQTLQQVFGYDDFRPGQRPVIEAITAGRSAAAIFPTGSGKSLCYQLPALHLPHLTLVI
SPLLALMQDQLAFLARHGIAAASIDSGQSREETAAVMEGVKRGEIRILMVSVERLKNERF
RAFIRRVPISLLVVDEAHCISEWGHNFRPDYLKLPHYRHEFGIPQVLLLTATAAPRVIAD
MRERFDIAEGDVTATGFYRPNLNLEVAPVPAETRARRLVEWLRPRLGGEPPQPTIVYVTL
QQTAERLAAYLSKAGFVATAYHAGLDAETRERLQRDFMAGNTPCIVATIAFGMGIDKADI
RNVVHFDLPKSVENYSQEIGRAGRDGQPSDCLMLAGRDHVNVLENFVYGDTPELHGIRKV
IDELIEAPGAARQWELVLNSLSQHSNIRPLPLKTLLVQLELRGIIAPRYSYFAEYRFRLH
DEPEALVSRFEGERSAFVQAILDASQRARTWFSLDFTALERLGEERGLNVERARVLTALD
YFVAQGWMVLESKQMTEVYEVLRDDIDPAALTEELHAYFHDKERAEVDRLHAMLALFESE
ACLSRRLAEWFGDTRAPECCGHCSACRGVVAQLPSPEPLEPLQGETIERLTGELVQQLSV
SDEPHPASPDLLARFLCGLTSPLLTRLKARRLAGFGALEAYRYAEIRELAARSSWVDGQA
SAAPMP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcaaacgttacagcaggtcttcggctatgacgacttccgtcccgggcagcgc
ccggtcatcgaagcaatcaccgccggccgttcggcggcggcgatctttcccaccggctcg
ggcaagtcgctttgctatcagctgccggccctgcacctgccccacctgaccctggtcatc
tcgccgctgctggcgctgatgcaggatcagttggcgtttctcgcgcgccatggcatcgcc
gccgccagcatcgactcgggccagagccgcgaggaaacggcggcggtgatggaaggcgtc
aagcgcggcgagatccgtatcctcatggtctcggtggagcggctcaagaacgagcgcttc
cgtgccttcatccgccgcgtgccgatctcgctgctggtcgtggacgaggcccactgcatc
tcggagtggggtcacaactttcgcccggactatctcaagctgccccactaccggcatgag
ttcggcatccctcaggtcctgctgctgaccgccacggccgcgccgcgggtgatcgccgac
atgcgcgagcgcttcgacattgccgagggcgacgtgaccgccaccggcttctatcgtccc
aacctcaacctggaagtggcaccggtgccggccgaaacccgggcgcggcgactggtcgag
tggctccgtcccaggctcggcggcgaaccgccccagcccaccatcgtctacgtcaccctg
cagcagaccgccgaacgcctggccgcctacctgagcaaggccggtttcgttgccaccgcc
taccacgccgggctcgacgccgagacccgcgagcgcctccagcgcgacttcatggccggc
aatacgccctgcatcgtcgctaccatcgccttcggcatgggcatcgacaaggccgacatt
cgcaacgtggtgcacttcgacctgcccaagtcggtcgagaactacagccaggagatcggc
cgcgccggccgcgacggccagccctccgactgcctgatgctggccgggcgcgatcacgtc
aacgtgctggagaacttcgtctacggcgacacccctgagcttcacggcatccgcaaggtg
atcgacgagctgatcgaggcccccggggccgcacgccagtgggagctggtgctcaactcg
ctctcccagcacagcaacatccgcccgctgccgctcaagacgctgctggtccagctcgaa
ctgcgcggcatcatcgcaccacgctacagctacttcgccgagtaccgcttccgcctgcac
gacgagcccgaggcgctggtgtcgcgcttcgagggcgaacgcagcgccttcgtgcaggcg
attctcgacgcctcccagcgtgcccgcacctggttcagcctcgacttcacggccctcgag
cggctgggcgaggagcgcggcctcaacgtcgagcgcgcccgcgtgctcaccgcgctggac
tacttcgtcgcccagggctggatggtgctcgagagcaagcagatgaccgaggtctatgag
gtgctgcgcgacgacatcgacccggcggccctgaccgaggagctgcacgcctatttccat
gacaaggagcgggccgaggtcgaccgcctgcacgccatgctggcgctgttcgagagcgag
gcgtgcctgagtcgccggctagccgaatggttcggcgatacccgagcacccgagtgctgc
ggccactgctcggcctgccgcggcgtcgtcgcccagttgccctcccccgagccgctcgag
ccgcttcagggcgaaaccatcgagcggctcacgggtgaactggtgcagcaactgtccgtc
agcgacgaaccccatcctgccagccccgacctgctggcgcgcttcctgtgtggcctgacc
agccctctgctcacccggctcaaggcgcgacgcctggcgggcttcggcgcgctggaagcc
taccgctacgcggagatcagggaactggccgctcgctcgtcatgggtggacggtcaggcg
tcggcggcaccgatgccgtag
DBGET
integrated database retrieval system
