Billgrantia sulfidoxydans: HNO51_12830
Help
Entry
HNO51_12830 CDS
T08035
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsx
Billgrantia sulfidoxydans
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsx03032
]
HNO51_12830 (topA)
03400 DNA repair and recombination proteins [BR:
hsx03400
]
HNO51_12830 (topA)
Enzymes [BR:
hsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HNO51_12830 (topA)
DNA replication proteins [BR:
hsx03032
]
Prokaryotic type
DNA Topoisomerases
HNO51_12830 (topA)
DNA repair and recombination proteins [BR:
hsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNO51_12830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF6950
Motif
Other DBs
NCBI-ProteinID:
QTP55491
LinkDB
All DBs
Position
complement(2774345..2776972)
Genome browser
AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSEFVVKSSVGHIRDLPTSGSGKAASDPKERARQAAATR
KMSPEEKAEYKKHKARDQLIRRMGIDPEQGWKAHYEILPGKEKVVAELQKLAEKADTVYL
ATDLDREGEAIAWHLKETIGGDDARYRRVVFNEITKNAIKEAFQEPGTLNIPRVEAQQAR
RFLDRVVGFMLSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRAFVPEEFWDVHADLVS
DQGEPVRFELVRQDGKTFRPTSEAETLERIERLRKASLAITAREDKPTRSKPNAPFITST
LQQAASGRLGFSVKKTMTLAQRLYEAGYITYMRTDSTNLSQDAVAMAREHIEQAYGKRYL
PESPNRYSSKEGAQEAHEAIRPSDVNRQAGDLAGMERDAERLYDLIWRQFVACQMTPAEY
LSSTLSVEADGYELKAKGRVLKFDGYTRVLKPAGKNEDQALPDLAEGTPMRLEALDPQQH
FTKPPARYTEASLVKELEKRGIGRPSTYASIISTIQDRGYVKLESRRFYAEKLGDIVTER
LKESFPDLMDYSFTARMEDSLDEVAEGERNWRELLDAFYAEFREELEAAESEEGMRPNQP
VPTDIDCPTCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLLPGDEAVPADAGEEAE
TQALRAKHRCPKCGTAMDSYLIDESRKLHICGNSPDCEGYEIEHGRFRIKGYEGPTIECD
KCGSEMQLKSGRFGKYFGCTNEACKNTRKLLRNGEVAPPKMDPIPMPELACQKVDDHYVL
RDGASGLFLAASKFPRNRETRPPLVRELKAHAGELPEKYRYLLDAPSEDPDGRPAQIRYS
RKSKEQFVMTEEESKATGWRAIYADGRWQVEDKRK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcattggtcatcgtcgagtcgccggccaaggccaagacgatcaacaagtat
ctcggcagcgagttcgtcgtgaagtcgagcgtgggacacatccgtgacctgccgaccagc
ggctcgggcaaggcggcctccgatcccaaggagcgcgcccggcaggcggcggcaacgcgc
aagatgtcgcccgaggagaaggccgagtacaagaaacacaaggccagggatcagctcatc
cggcgcatgggcatcgatcccgaacagggctggaaggcccactacgagatcctgcccggc
aaggagaaggtggtggccgagctgcagaagctcgccgagaaggccgacaccgtctatctc
gccaccgatctcgaccgggagggggaggccatcgcctggcacctcaaggagaccatcggc
ggcgacgacgcgcgctatcgccgcgtggtgttcaacgagatcaccaagaacgccatcaag
gaggcgttccaggagcccggcacgctcaacattccccgtgtcgaggcgcagcaggcacgg
cgcttcctcgaccgcgtggtgggcttcatgctctcgccgcttctgtgggccaagatcgcc
cgcggcctctcggccggccgagtgcagtccgtagcggtgcgcctcatcgtcgagcgcgag
cgcgagattcgcgccttcgtgcccgaggagttctgggacgtgcatgccgatctcgtctcc
gaccagggcgagccggtgcgattcgaactggtgcgccaggacggcaagaccttccggccc
acctcggaggccgagacgctcgagcgtatcgagcgtctgcgcaaggcaagccttgccatc
acggcgcgggaggacaagcccacccggtcgaagccgaatgcccccttcattacgtcgacc
ctgcagcaggccgccagcgggcgcctcggcttctcggtgaagaagaccatgaccctggcc
cagcgcctctacgaggcgggctacatcacctacatgcgtaccgattccaccaacctgtcc
caggatgcggtggccatggcgcgcgagcatatcgagcaggcctacggcaagcgctacctg
cccgagtcgcccaatcgctactcgagcaaggagggcgcgcaggaggcccacgaggcgatc
cgcccctccgacgtcaatcgtcaggccggcgacctggccggcatggagcgcgacgccgag
cgactctacgatctgatctggcggcagttcgtggcgtgccagatgacgccggccgaatac
ctctccagcaccctctccgtggaagccgacggctacgagctcaaggccaaggggcgggtg
ctcaagttcgacggctatacccgggtgctcaagcccgcgggcaagaacgaggaccaggcg
ctgcctgacctcgccgagggcacgccgatgcggctcgaggcgctcgacccccagcagcac
ttcaccaagccgccggcccgctataccgaggcgagcctggtcaaggagctggagaagcgc
ggcatcgggcgtccctcgacctatgcctcgatcatctccaccatccaggatcgcggctac
gtcaagctggagagccggcgcttctatgccgaaaagctcggcgacatcgtcaccgagcgg
ctcaaggagtcgtttcccgacctgatggactactcctttaccgcgcgcatggaggacagt
ctcgacgaggtcgccgagggcgagcgcaactggcgcgagctgctcgacgccttctatgcc
gagttccgcgaggaactggaggccgccgagagcgaggagggcatgcgccccaaccagccg
gtgcccaccgatatcgactgccccacctgtggccgcaagatgcagatccgcacggcgtca
accggagtgttcctgggttgctccggctacaacctgccgcccaaggagcgctgcaagacc
accatcgacctgctgcccggcgacgaggcggtccccgccgatgctggcgaagaggccgag
acccaggccctgcgcgccaagcatcgctgccccaagtgcggcacggcgatggacagctat
ctgatcgacgagagccgcaagctgcatatctgcggcaacagcccagactgcgagggctac
gagatcgagcacggcaggttccgcatcaagggctacgaggggccgaccatcgagtgcgac
aagtgcggcagcgagatgcagctcaagtcgggccggttcggcaagtatttcggctgcacc
aacgaggcatgcaagaacacccgcaagctgctgcgcaacggtgaggtcgccccgccgaag
atggaccccatcccgatgcccgagctggcctgtcagaaggtcgacgatcactacgtgctg
cgcgacggtgccagtggcctgttcctggcggcgagcaagtttccgcgcaatcgcgagacg
cggccgcctctggtgcgggaactgaaggcccacgccggtgagctgccggagaagtatcgc
tatctgctcgatgcccccagcgaggatcccgatggccgcccggcccagatccgctactcg
cgcaagagcaaggagcagttcgtcatgaccgaggaagagagcaaggcgaccggctggcgg
gcgatctacgctgacggtagatggcaggtggaggacaagcgcaagtga
DBGET
integrated database retrieval system
