Hydractinia symbiolongicarpus: 130612141
Help
Entry
130612141 CDS
T09218
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04150
mTOR signaling pathway
hsy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130612141
04150 mTOR signaling pathway
130612141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130612141
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130612141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
FXa_inhibition
Ldl_recept_b
EGF_LRP2
Orf78
7TM_GPCR_Srw
Adeno_E3_CR2
Baculo_11_kDa
Protocadherin
CLSTN_C
DUF515
DUF4386
Baculo_VP91_N
DUF3169
Syndecan
Motif
Other DBs
NCBI-GeneID:
130612141
NCBI-ProteinID:
XP_057289418
LinkDB
All DBs
Position
10:3544996..3551916
Genome browser
AA seq
950 aa
AA seq
DB search
MVAPAYIAVNPHISKMFWFNRGPGVANFTLWEAGLDGSSPKRLHGNISQPLCIAIDYNTS
IIYWTQFNQGTGMTSLKSFDRRTNQMKSPYDNVARYSVGMVFKDKFLYADHDIGAIKEVP
INGRTVTAAKILIYEDDWIHNIKAFHGSMQKGNNSCSVNNGGCSQLCFATSLTEHRCGCG
THFTLLADGKTCTAPQQFIIFTSGSLLIRLMFDSSKPEAVLPIFNDEAVSQIDYDFMRGY
VYWLVAKKNVIAKSQQHGTLHEVIHLVNETDEDLSAAYDFSLDPFSNSLYWTDSLQNSIN
FLQLTTKANGTVYKDTKKIVHPRKIVVFPEMALMFWNDGNTNRIFKSTLAGTQPEALIQL
HKDSVVRDLSLDVIQKNVYWLDSGLRRISSISIFGGEVRNHDLPKHGTNPVSMGIFSKFV
FWADSSTKFIHKAWITNDSFEGDTGFHGTYPLTIDMVVVNNSRKRESHPCFINNGGCSHV
CSIHYVSGIDNTKREETALCGCPLHQEARNKTCVQSAACKENEFFCVLDGICLPESKVCD
KKCDCGDCHDEKSCSYPTDCSTSLYKCGLGCFSEEQKCDKKQDCPDNEDESEDLCAPCVK
GHFHCGGQMCIPLDMKCDGKPDCSDGGDEKNCQTNATTPTGFPNPQQGSNKSRLMSGIIS
GIVICVIVIVFVILLYVKLRNSKKNAARQQENGAMWRIEEFENKAGSVTSDDPAKSSVST
YISAVSHNTDPISYYDRNNVTGASSSVASGYTHIPYNPPPSPIALSTITETNDPYASATC
EQCRNSIQETPMEEVLHDAPPPTLASTGLLEEVDLYYPIQQSHNWKPPKTVCDSCETSRS
RSRKKRRSNHRPEHSYRSSLSRYPSNAPELEALYQSRETNMDDPYDQNSLFVDRQRHLLF
DPPPTPCTYLSDEERPPSPTETEQSLAFSPMHRGELRPHYAPPPSPTSQL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaccagcttatattgctgtaaaccctcatattagcaaaatgttttggttcaac
agagggcctggcgtggctaatttcacattatgggaagctggactagatggtagcagccct
aaacgactacacggtaacatatctcagccattatgcattgctattgactacaatacaagc
atcatatattggacacagtttaatcaaggcacaggaatgacgtcattaaagagttttgat
cgtagaactaatcaaatgaaatcaccatatgacaatgtggcgaggtatagtgtaggcatg
gtgtttaaggacaagtttttatatgcagaccatgacatcggagccataaaagaagttccc
attaatggcagaactgtgacagctgctaaaatacttatttatgaagacgattggattcac
aatataaaagcgtttcatgggagcatgcagaaaggcaacaatagttgttcagtaaacaac
ggtggttgttctcaactttgtttcgccacctcgctgactgaacatagatgtggttgcggt
acacatttcaccttgctggctgacggcaaaacatgcacagccccacagcagtttataatt
ttcacatccggctccttattgatccggcttatgttcgattcgtcgaaaccggaagcagtc
ttgcctatattcaacgacgaagcagtcagtcagattgattacgatttcatgcgcggatat
gtgtattggttggtggcaaagaaaaatgtcattgccaaaagtcaacagcacggtacgcta
cacgaagttatccacttggttaacgaaacagatgaagacttgtctgctgcttacgacttt
tctcttgacccgttcagtaattctttatattggactgatagcttacaaaactctataaat
tttctccagttaacaacaaaggcgaatggaactgtgtataaagacactaaaaagattgtg
catccgcggaaaattgttgttttcccagaaatggcgttgatgttttggaatgacggaaac
actaacagaattttcaaatcaactctggctggaacgcaaccggaagcactgattcaattg
cataaagacagtgtggttcgagatttatccctagacgtaatacaaaaaaatgtttattgg
ttagactctggtttgagaagaataagcagcatctcgatatttggaggggaagtcagaaat
catgacttaccaaaacatggaactaaccctgtttcgatgggtattttctcgaagtttgtc
ttctgggcagatagcagtactaagtttatacataaggcctggattactaatgattcattc
gaaggtgatacaggctttcatggcacgtatcctctcaccattgacatggtggttgttaac
aacagtagaaaacgcgagagtcatccgtgttttatcaataatggcggttgcagtcacgtg
tgttccattcattacgtcagtggtatagataatacgaagcgagaagaaaccgcgttgtgt
ggttgcccgcttcatcaggaagcgagaaacaaaacgtgtgttcagtctgctgcttgtaaa
gaaaatgagtttttttgcgtattggatggtatatgtctccccgagtctaaagtatgtgat
aaaaagtgcgattgtggggattgtcacgatgaaaaatcatgcagttatcctacagattgt
tctacttcgctttataaatgcggactaggctgcttttctgaggaacagaaatgcgataaa
aaacaagactgtccagacaatgaagatgaaagtgaagacctctgcgcaccatgcgtgaaa
ggacattttcactgcggagggcaaatgtgcattcctcttgatatgaaatgtgatggcaag
ccggattgtagtgatggtggggatgagaaaaattgtcaaacaaacgcgacaaccccgacc
ggctttccaaacccacaacaggggtcgaataagtcaaggttaatgtctggtatcatatca
ggaattgttatatgtgttatcgttattgtgttcgttattttattgtacgttaaactacgt
aattcaaaaaagaatgcggcacgacaacaggagaacggtgcgatgtggagaatagaggag
tttgaaaacaaagccggctccgtaactagtgacgacccggcgaaaagttctgtgtctacg
tacatatctgcagtgtcgcacaataccgacccgatatcatattatgatcgaaataatgtg
acgggtgcatcatcttctgtagcgtccggatatactcatataccgtacaaccctcctcct
tctccgattgccttgtctacgataacagaaacaaacgatccttatgcttctgctacgtgt
gaacaatgtagaaattctattcaagagacacctatggaggaggtcctgcatgatgctcct
cctcctacgctagcttcgacaggattactagaagaggtcgatttatattatcctatacaa
caatcacataactggaaacctccgaagactgtatgtgacagttgtgagacttcgcgtagc
cggtcgcgtaaaaaacggcgctccaatcatcgtccggagcattcgtatcgcagcagtctt
tcgagataccccagtaacgctccggaactggaggctttgtatcaaagtcgtgaaactaac
atggacgacccttatgatcaaaattctttattcgtggatcgacaaagacatctcctcttt
gatccacctcctacaccctgtacatatttatcggacgaggagaggccgccttcgccgaca
gagaccgaacagagtctagcattcagtccaatgcacaggggtgagttgcgacctcattac
gctcctcctccgtctccaactagtcagttataa
DBGET
integrated database retrieval system
