Hydractinia symbiolongicarpus: 130612254
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Entry
130612254 CDS
T09218
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like isoform X1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
hsy
Hydractinia symbiolongicarpus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
DEAD
AAA_22
ResIII
SLFN-g3_helicase
PhoH
AAA_16
IstB_IS21
AAA_5
nSTAND3
SKA2
RRP7
Motif
Other DBs
NCBI-GeneID:
130612254
NCBI-ProteinID:
XP_057289542
LinkDB
All DBs
Position
10:9894148..9909332
Genome browser
AA seq
1884 aa
AA seq
DB search
MDFSSPFFVERSYNRRGRGGGGRGGGGRGGRGGGRGGRGGGRGGGRGGGRGANNANRGQR
TIGFGLLKAWNQLDDNDELLVRMAASKDMLLQLLNSPVLKDDWNFELLVIYSKVCEVRRS
QNQISILSLLHGCQYMTSGLKRSLIIWGLTCTMEKNITIANSLLTLIDVYFKNFPSRCMD
MPLDELAAFISGNLIGERDLVQKVNTLTRARRELIQKTQAPVKKPPREQFTNEPPPDNFR
DIPTIPDINDIYREEKPYLRPIKSRGGYSNGEEYLDVQFRLLREDLVCPLREGVQEIIEE
IPRKNRKHALNVYNRVQVLFPLCTKSGIIHRVSFDTTYTKGIPWQHSKRLIFGSLVCLSK
DQFQTIIFATVADRSPENLRKGLVDLRFVGGLETQNYFAKGELMEMVESSVYFEAYKHVL
NGMKEFDGEEIPMQRYIVECTSDVKPPAYLQRRDVLAPRYNLRSSLKTKQLVADSVRILN
DRFWPTYDLTDLNQSQLNAFKHALTKEFVVIQGPPGTGKTHVGIRIADALLQNSQAWNLD
QKAPMLVVCYTNHALDQFLSGIIEFGHTDVVRVGGRASEEMKKYSLREALTRLKGTSRRQ
RNEPDDFKFLRRAKAQSLEERDNLIAAIERDTGNIRACQNLLQSGNLVHLKKLLFIMKEE
HQEAFVTFDAHCWGLKISVFDIFLDIIKIPIDNITAFKIAENIGDAKNEVAVASAADPKK
NNPGDNEVNDDEVDENGVDVEGEGEVLVERWVADTNEYQVLNVKKQIEHEVQEEREKNIL
VDSDGFTVVQPSRQEKKNRIQRLLRSYEPMSSAEANDVENPWDLSLDNRCRLYKYWLQKL
YEEMYENYSRQAEKLEEVCQQVNELQQQEDEIAMRKADVIAMTTTCAARYRTALQKIQPK
VVIIEEAAEVLEAHVLTALSGGIEHLILIGDHQQLKPNPAVYELATRYSLEVSLFQRMVD
NGMECHTLDIQHRMRPEISILLRHIYPKLRNHASVRSYPCVKGVGNNVMFINHHEKENQV
AHMKSKANKHEAEFIKALCFYFLQQGYQPSQITILTGYTGQLIQMKHIMPKEVFNGVRIT
AVDNFQGEENDIILLSLVRSNDQGSIGFLKTDNRICVALSRAKHGLFVIGNFDLLKEQSV
LWRKIINDATMYGSFGKSMKLCCQNHTDTIINAGNAADFLQAPEGGCIRPCEFRLDCGHV
CEKACHPVDPEHVEYVCKKRCLKATCNLGHQCQKQCHHGKDCGLCIARVKRIVPKCGHVQ
QMLCKQDPTQFGCLEKCNKVLECGHPCKLSCKEDCQKQRCFAQVPKLLPCQHRVHVTCHS
DVSTVRCNSPCKAKLDCGHICSGTCGECKQGRLHKKCSQECGRILVCSHGCKEPCTKNCP
PCMLQCENRCVHSRCEKKCGEVCSPCREACTWHCRHKECTKRCGEICDREPCNRPCKKRL
RCGHLCIGLCGEICPNVCRVCDREKVKEIFFGDEDEASARFIVLEDCQHYFEVNGMDRWM
QQDNGDGGNVKMKECPRCKTIIRKSVRYGNIVKNSLKDINEIKKKIIESGRSDLAGVKEN
AYQKCRDVNKLVQEIPFLDRFRFLNRVASSMALEEDANFTTFAYNLKRNIRPRDNQNNAS
VLATRLVKSSLGYEAVNGLFHQAAILEALWKLKKEVFENKSLRNEKDEILKGMVGLEDFI
MSERMSEQQVKDANEDLERNHVYVSVIVCVTQLKQKEKDIETWRDSQEMADLSTKARAIK
WLRLAKHEENVLLQIKAEIEEGKKLRKTKIKEIKASVDEIKRRFELEGLAEQERIMIVKA
MGLGKGHWYKCPNGHFYAIGECGGATETGKCPECGAVIGGRSHTLAAGNQHAGNFDGSTH
AAYSEAANNMMNWDQEALRRLQLE
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaagtccattttttgttgaaagatcctataatcggagaggaagaggaggt
ggtggcagaggaggcggtggtagaggagggcgtggtggagggcgcggtggcagaggaggt
ggtcgtggaggtggtcgtggaggtggtcgtggagccaataatgcgaacagaggacaaagg
acaatcggcttcggtttgttgaaagcatggaatcagctggacgataacgacgaacttttg
gtcagaatggctgcatccaaagatatgctattgcagctactcaacagtccagtactaaaa
gacgactggaactttgaacttcttgtaatatattcgaaagtctgtgaagttcgacgtagt
caaaaccaaatctcaattttatctctccttcatggttgtcaatacatgacatcaggttta
aaaagaagtcttataatatggggattaacttgcacaatggagaagaacataacgatagca
aattcgttgctaacattaattgatgtgtatttcaagaatttcccttcgcgttgcatggat
atgccgttagatgaactggcagcgtttatcagtggcaatttgattggagaaagagatctt
gtccaaaaggtcaacacacttacaagagcgagaagggaattgatccagaaaacacaagcg
ccggtcaagaagccacctcgtgagcaatttacaaacgagcctccacctgacaattttagg
gacatcccgactattcctgatataaacgatatttaccgtgaagaaaagccttaccttcgg
ccaatcaaatcacgcggaggttactctaatggtgaggagtatttggatgttcaatttcga
ctattgcgagaagatctggtgtgtccactccgtgaaggtgtgcaggaaataattgaagaa
attccacggaaaaatagaaagcacgcgctgaatgtttacaacagagttcaagttttgttt
cctctctgtacaaaaagtggcatcattcatcgtgtcagttttgacacaacctatactaaa
ggtataccttggcaacactcaaaacggctaatttttggatctttagtatgcctgagtaaa
gatcaattccaaacgataattttcgccactgttgctgatcgaagtccagaaaatcttagg
aagggattggttgatttaagatttgttggtggacttgaaacacaaaattattttgcaaaa
ggagaattgatggaaatggtggagagctcggtatattttgaagcatataaacacgtatta
aatggaatgaaagagtttgatggagaagaaattccaatgcagagatacatagtcgaatgt
acctctgatgtcaaacctcctgcttatcttcagcgtcgggatgttcttgctccaaggtat
aatttgagaagttctttgaagactaaacaattggtcgcagattctgttcgtatactcaat
gatcgcttttggccaacatacgatcttactgatctgaaccaatcacagttaaatgcattc
aaacatgcgctcactaaagagtttgtagttatccaaggtccacctggtactggaaaaaca
catgttggtatcagaattgcggatgctttgttacaaaactcacaggcttggaacttagac
cagaaagctccaatgttggttgtatgttatacaaatcatgctttggaccaatttcttagt
ggcatcattgagttcggacacactgatgttgtacgtgtaggtgggcgagcgagtgaggaa
atgaaaaaatattcacttcgagaggcactaacccgtctaaagggaactagtcgtcgccaa
agaaacgaacctgatgatttcaaattccttagaagagcaaaagcacaatccttagaagaa
agggataatcttatagctgctatagaaagggacacaggaaacataagggcttgtcaaaac
ctgttgcaatcaggtaacttagtccatttaaaaaaattgctatttattatgaaggaagaa
catcaagaagcatttgtaacctttgatgcacattgttggggcttaaagatatctgttttt
gatatatttcttgacatcataaaaataccgattgacaacatcactgcgtttaaaatagct
gaaaacattggcgatgcaaaaaatgaagttgcagttgcgagcgcagctgatcctaaaaaa
aataatcctggtgataatgaagttaacgatgacgaagtcgacgagaatggagtggatgtt
gaaggtgaaggagaagttctggtggaaagatgggttgctgatactaacgagtatcaagtt
ttgaatgttaaaaaacaaatcgaacatgaagtccaagaagaaagggagaagaatattttg
gtggacagtgacggctttacagttgttcaaccatcacgtcaggaaaagaaaaatcgcata
caacgtttattgcgaagttatgagccaatgtcatctgcagaggctaatgatgtagagaat
ccatgggatctgtctctcgataatagatgccgactgtacaaatactggttgcaaaagttg
tatgaagaaatgtatgaaaattattcacgtcaagctgagaagcttgaggaagtctgtcaa
caagttaatgaacttcaacagcaagaagatgaaatagccatgagaaaagccgatgtaatt
gccatgacaactacttgtgctgctcgatatcgaacagctctgcagaagattcaaccaaag
gtggttataatcgaggaggctgctgaagttttagaagcacatgtgttgacagcattaagc
ggtggtatagagcatttgatattgatcggtgatcaccaacagttaaaaccgaatcctgca
gtttatgagctagccactcgctattctttggaagtgtcgttgttccagagaatggtagat
aatggaatggaatgtcatacacttgatatacaacacagaatgcgaccggagatatccata
cttcttcggcatatctatccgaagttaagaaatcatgcatctgtgaggagctatccatgt
gttaaaggcgtcggtaataatgttatgttcatcaatcaccacgaaaaggagaatcaggta
gcgcacatgaaatcaaaagcaaataaacatgaagcagaattcataaaagcgctatgcttc
tatttcttacagcaaggatatcagcctagtcagattacaattttaacaggttacactggc
caactcattcaaatgaaacatatcatgccaaaagaggttttcaacggtgtaagaataaca
gctgttgataactttcagggtgaggaaaatgacatcattctcttgagcctggtaagaagc
aatgatcaaggaagcattggatttctaaagacagataatcgcatatgtgtcgcattgtca
agagcgaaacatggattatttgttataggaaactttgacctgcttaaagaacaaagtgta
ttatggagaaagataattaatgatgccacgatgtacggaagtttcgggaaatcaatgaag
ctatgctgccaaaatcataccgatacaattataaatgcaggaaatgctgcagattttttg
caagctcctgaaggtggttgtatacgaccgtgtgaattcaggttagattgtggtcatgtt
tgcgaaaaagcatgtcatccagttgatccagagcatgtcgagtacgtatgcaagaaacgt
tgcctcaaggcaacgtgtaaccttggtcatcaatgtcaaaagcagtgccatcatgggaaa
gattgtggtttatgtattgctagagtgaagagaatagtaccaaaatgtgggcacgttcaa
caaatgttatgcaaacaagatcccacacaatttggttgtttggaaaaatgcaataaggtg
cttgaatgcggccatccttgcaaattaagttgcaaagaagactgtcagaaacaaagatgt
tttgctcaggttccaaagcttttaccttgtcaacacagggtgcatgtcacgtgtcattct
gatgtttcaactgtcagatgcaattctccctgcaaagctaagctagattgtggtcatatt
tgttctggaacatgtggggagtgtaagcaaggccgacttcacaaaaaatgctcacaagaa
tgcggaagaatacttgtatgctctcatggatgcaaagaaccatgtacaaaaaactgtcca
ccttgcatgttacaatgtgaaaacaggtgtgttcacagcaggtgtgagaagaaatgtggt
gaagtttgctcaccgtgcagagaagcatgtacatggcattgtaggcacaaggaatgtaca
aaacgctgcggtgaaatatgtgacagggagccttgtaacagaccgtgcaaaaagaggtta
cgctgtggacatttatgcattggtttatgtggggaaatttgccccaatgtatgtcgcgtt
tgtgatagagagaaagtgaaagagattttctttggggacgaagatgaagcatcagcacga
tttattgtccttgaagattgtcaacattactttgaagttaatggaatggacaggtggatg
caacaggataatggagacgggggaaacgtaaagatgaaggaatgtccacgctgcaaaacc
atcatccgcaagagtgtaagatatggaaatattgtgaagaattcattaaaagatataaac
gaaataaagaagaagattattgaaagtgggagatctgacctagcgggcgttaaagaaaac
gcttatcaaaaatgtcgagatgtcaataaactagtgcaagagattccgtttttggacaga
tttcgatttttgaaccgcgttgcttcaagcatggctttagaagaagatgcaaattttact
acgtttgcatataatttaaaacgcaatattagaccgcgtgataatcaaaataatgcatca
gtgcttgctactcgattagtgaaatcctctttgggatacgaagcggtgaacggcttattt
catcaggctgcgatactggaagcattgtggaaattaaaaaaggaggtctttgaaaacaaa
agtttgcgaaatgaaaaggatgaaatcttaaaaggtatggtggggcttgaagactttatc
atgtctgaaaggatgagcgaacaacaagttaaagatgcaaacgaagatttggaaagaaac
cacgtctatgtaagtgttattgtttgtgtaactcaattaaaacaaaaagagaaggacatt
gaaacatggagggattctcaagaaatggcagatctgtcaactaaagctagagctataaaa
tggcttagattagctaaacatgaagaaaatgttctattgcaaattaaagcagaaatagaa
gaaggaaaaaaattaaggaaaacaaagattaaagagattaaagcgagtgttgatgaaatc
aagagaagatttgaattagagggcttggctgagcaagagagaataatgattgtaaaagcg
atgggtcttggaaagggccattggtacaaatgtcctaatggccatttttatgctattggc
gaatgtgggggcgcaactgaaactggaaaatgtcccgaatgtggtgcagttattggcgga
cgaagtcacactttggctgctggaaatcaacatgcaggcaatttcgatggttccactcat
gcagcttattctgaagctgcaaacaacatgatgaactgggatcaagaagcattgcgccgc
ctccaattggaataa
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