Hydractinia symbiolongicarpus: 130613177
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Entry
130613177 CDS
T09218
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hsy03029
]
130613177
Enzymes [BR:
hsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130613177
Mitochondrial biogenesis [BR:
hsy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
130613177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
TPR_24
PPR_long
Motif
Other DBs
NCBI-GeneID:
130613177
NCBI-ProteinID:
XP_057290487
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All DBs
Position
10:complement(20840626..20856815)
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AA seq
1126 aa
AA seq
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MLSLLRGACKSCQTLQSRTTPIKGWRSHYKVYNFRCIASSSDVFNKPVAVKKQCGEIYDS
VVQDGNVWANIQHDIVDAETFEFLKERYNERIQEINSQKLEEVNKITSKSKAKKKAHKTK
PTTSKFVRGSQLTYKGEQSVLAEIDIYLYLGDLQSAVNLFNYHRRHGHKFNIEGYNKMIH
AWASHKSWKNIQLLLRNMKREELEPNYQTYAGLLEACGNLDDVVRTESVISEMEDQGIDV
RQVLLKSSLTKQQVSAIVYALGKIYPNYLNQAKTSHTSVCKSTIYHLRNNDAAKIIKSQI
DLELKGSLEIPSIDVTKVHSSLAVKRSRLYQTIIDQWRKDFITELVQVRKFKNNRAFMYN
RCVTFASVLTPDELADILFDNIVPLICSQPQGIPVNFICRRLGRMMYSRFCAKFKNDNGV
VEKVQGICEEYTSATEWIDGSLEPRKKWNEINSMLPYLASEDIAPTLWPTKIKAMASSVV
LDILKKVATIDTSIFLKSKRGKIEPSLSHHHEFIGHHQIGILKFHPTVGRLYSSYLSQLG
NISFEVNKLPICIPPRPWTSSNSGAYLLLHSDLVRTVTGEYKLNELSKASKNGDIDRIFD
CLNYLGNCAWKVNERILDIMIDLFNGDGDMKLDIIGPKLPYVEQWKSKRAMTLEERKSRQ
RRKKLYHELFALRMDQLYKLSVSNYFRHSVFWIPNNLDFRGRIYPIAPHCSHIGSDVSRG
LLLFADGKPLGKKGLNWLKVHLVNVHGQLKKSSLQERIEFVDRHIDDVMDSADNPLTGRK
WWQDGSDPWQTLVACMELTDAIRSGDPENFVSHIPVHQDGSCNGLQHYAGLGRDEYGAKQ
VNLMPSDRPQDVYMEVANLVEKTRNEDAAEGLAIAQLLEGKVTRKVVKQTVMTVVYGVTF
VGGRLQIEKQLKELGVGSDIIFKASVYVVQEVFKSLTEMFTSARLIQDWLTISAAQIALT
GNCVDWVTPLGLPVIQPYHRETTESISTPLQTVSSSHYFDYTQIPNLTKQKGGFPPNFIH
SLDSSHLMLTALRCQEHQMTFASVHDSFWSHACDVDLMNKFCREEFVALHQLPILDDLKQ
HFDKKFAGKPLRKPLKDGTKAANFNALPEQGSFDIKKVLDSVYFFS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtttattgagaggagcttgtaagtcatgtcagacactgcaatccagaacaact
ccaattaaaggatggcgttcacattataaagtgtacaattttcgatgcattgcctcatcc
tctgatgtgttcaataaacctgttgctgtcaagaaacaatgtggcgagatttacgattct
gtcgttcaagatggaaatgtgtgggcaaatattcaacatgatatagttgatgcagagact
tttgaatttctcaaagaacggtataatgaacgtatacaagagataaatagccaaaaatta
gaggaagtaaacaaaattacaagtaaaagtaaagctaagaaaaaagcccataaaacaaaa
cctacaacatcaaagtttgtacgagggagtcaactgacctacaaaggcgaacaaagtgtt
ttggcagaaattgacatatacttgtatttgggtgatctacaaagcgctgtgaatttattt
aattaccatcgcagacatggtcacaaatttaacatagaaggctacaataaaatgatccat
gcttgggccagccataaaagttggaaaaatattcagttactcttacgtaacatgaagcga
gaggaactggagccaaattatcaaacttatgctggtttgctggaagcctgtggcaatctt
gacgatgttgtgagaacagaaagtgttataagtgagatggaagatcaggggattgatgtg
cgtcaggtgttacttaaatcaagtctgaccaaacagcaagtgtcggcaatagtctatgca
ttgggtaaaatatatccaaattatttaaaccaagctaaaacatcacacacatctgtttgt
aaatcaaccatatatcacttgagaaataacgatgctgctaaaattatcaagtcacaaatt
gatttggaattaaaaggatcattagaaattccatctattgatgtcactaaagttcatagc
agtttggctgttaaacgctctcgtttgtatcaaacgataattgatcagtggagaaaggat
ttcattacagaactcgttcaagtccgaaagtttaagaacaaccgagctttcatgtacaac
aggtgtgttacctttgcaagcgttcttacacctgatgaactggcagatattctatttgat
aatattgttccattgatatgcagtcagcctcagggaattccagttaatttcatttgtaga
aggcttgggcgaatgatgtattcaaggttctgtgcaaagtttaaaaacgacaatggtgtt
gttgaaaaggtacagggaatatgtgaagaatatacatcagctactgaatggattgatgga
tctcttgaaccgcgtaaaaagtggaatgaaattaacagtatgctaccctatttggcatca
gaggatattgcaccaactttatggcctacaaagatcaaggcaatggcatcaagtgttgta
ctcgacatattaaaaaaagtagcgactattgacacaagtatttttttgaagtccaagaga
ggtaaaatcgaaccatcattgagtcatcaccacgaatttattggacatcatcaaattggg
atattgaaatttcaccctactgttggacgtctttatagtagttatttgtctcaattagga
aacatttcctttgaggtaaataaattaccaatttgtataccgccacgaccttggacatca
tccaatagtggagcttaccttctgctgcatagtgatctagttcgtacggtaacaggcgaa
tacaaacttaacgaattgtcgaaagcatcgaaaaatggcgatatcgacagaatattcgat
tgtttaaactatcttggaaactgtgcgtggaaggttaacgagagaattcttgatattatg
atcgacctatttaatggtgatggagatatgaagctggatattattggtccaaagttgccg
tatgtggagcagtggaagtcaaagagagcaatgactctggaagaaagaaaatctcgccag
cgccgcaagaagttgtaccacgagttgttcgcacttcggatggatcagctctacaagtta
tctgtttccaattattttcgtcactcagtgttttggataccaaacaacttggatttcaga
gggcggatctatcctattgctccgcactgctctcacatcggtagtgatgtatcacgtggt
ttgttattgttcgctgacgggaaacctcttggtaagaaaggcttgaattggttgaaagtg
catcttgttaatgtgcatggtcaactgaagaaatcgtcacttcaagaacgaatcgagttt
gttgacagacatatcgatgacgtcatggactcagctgataacccgctcaccggtcggaaa
tggtggcaggatggtagcgatccatggcagacgttagttgcttgtatggaattaacagat
gcaatacggtcaggtgaccctgagaattttgtctcgcatatacctgtgcaccaagacggc
tcatgtaatggattgcaacattatgctggacttgggcgtgacgaatatggcgctaaacag
gtgaatttaatgccatcagatagacctcaagatgtatatatggaagttgccaacttggtt
gaaaagactcgaaatgaagatgcagcagaagggttggccatcgcacagctactggaaggt
aaagttacacgtaaagttgtcaagcaaactgtaatgacggttgtctatggtgtaaccttt
gttgggggtagattgcaaatcgagaaacagttgaaagaattgggtgtcggcagcgatatt
atttttaaagcttctgtttatgtcgttcaagaagtgtttaaaagtttgacagaaatgttt
acgtctgcaaggttaatacaggattggttgacaatatcagctgcgcaaatcgcgttaact
ggcaattgcgtcgattgggttacacctcttggactccctgtgatccaaccttaccacagg
gaaaccacggagagtatttctactccactgcaaactgtctcgtcttcgcattattttgac
tatacacaaataccgaacttaacaaaacagaaaggaggttttcctccaaactttatacat
tcactggattcgtctcatttgatgctcacagcacttcgttgccaggaacaccaaatgacg
tttgcttctgtacacgatagtttttggtcacatgcttgtgatgtcgatctcatgaataaa
ttctgtcgagaagaattcgtagctttacaccagctgcctattctggatgatttgaaacaa
cattttgataaaaaattcgctggcaagccacttcgtaaacctctgaaggacggaacgaaa
gcagccaactttaacgcattacccgaacaaggttcctttgatatcaagaaagttttggat
tcagtttatttttttagttga
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