Hydractinia symbiolongicarpus: 130613335
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Entry
130613335 CDS
T09218
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130613335
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
130613335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_17
TPR_11
TPR_10
TPR_9
TPR_7
TPR_MalT
ARM_TT21_5th
TPR_Slam
ANAPC3
ARM_TT21_4th
PknG_TPR
TPR_21
RPN7
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
130613335
NCBI-ProteinID:
XP_057290671
LinkDB
All DBs
Position
10:complement(13060993..13085623)
Genome browser
AA seq
1091 aa
AA seq
DB search
MVAITSVEIPLRDTDEVIELDFDQLPDGEEVLSILEQESAVLHIWITLGQQYFKQGKHDD
FVKIFEAACREDFSTPNLEYKEYLQDKMVVLDSLAAYYVQEGRGEKDKDKKRELFTKATQ
LYTTADKIIMLDQNHLLGRAYFCLLEGDKMDQADAQFNFVLAQSTSNIPALLGKACISFQ
KRDYKSALAYYKKALRTNPNCPAEVRLGMGHCFYRLNRLEKARLAFERTLELNNRCTGAL
VGLAVLELNSKKPDSIKNGVQLLSKAYSIDNQSPMVLNHLANHFFFKKDYTKVQHLALHA
FHGTEVEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASTNFVLPWFGLGQMYIARG
DNVNAAQCFEKVLKFQPNNYETMKILGSLYSSSMEPEKKEIAKNHLKKVTEQFPDDVEAW
IELAGILEQTDVQAALSAYGAASKILKEKVEADVPPEILNNVGALHFRLGNLKEAKKFYE
AALDHCKEESMQDEAYYNAISVSMHYNTARLMEAQFEFDKAEKIYKDILREHASYVDCYL
RLGCMARDKGQIYEASDWFKMALQIDQDHPDAWTLIGNLHLAKQEWGPGQKKFERILKQP
ATANDTYALVALGNVWLQTLHTPSRDKTKEKRHQERAIAMFKQVLRTDPRNIYAANGIGC
VLAHKGHYREARDVFSQVREATAEVADIWLNLAHVYVEQRQFVSAIQMYENCLKKFYKSY
SVEVMFYLARAYYKAGRLSDCKHLLLKTRHVAPHDTLLMFNLSVVQQRLATGVLRNEKSN
LKAVLSAVGDLELAQRNFEYLSKYGDRMKFDLAHARSEAGRCSDLLSQAQYHVQRARRID
EEEKEVKKKQEEEREMLRKTKEEEEMKKVQQLEDEKKQLLEKRAQFKEATKGLLKFSAAE
MAAKEKAAKARKKKDNLDGLIATSSDEDELPKKKQERRKKKNVEYDENGEPLPKKKRQRT
KEPKPKKEPKMSAKQQLKIKSKATVSSDDDSSSDDEQGPVISKPSFKRMKSSSSESEAMP
SEASAKDSNSDSDNEKSYVPKKIISENESDGSDAGETSKQVPTDDGKTEEDAGPKTKRKA
RIISSSESDGD
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgataacttcggtagaaattcctcttcgcgatacagatgaggtgattgaatta
gattttgatcagttacctgatggtgaagaggttttaagtattttagagcaagaaagtgct
gttctgcatatatggatcacattgggacaacaatactttaaacaaggaaaacatgatgac
tttgttaaaatatttgaagctgcctgtcgtgaggacttttcaacacccaacttggaatat
aaggaataccttcaagataagatggttgttctcgactcactggctgcttactatgtacag
gaaggtagaggagaaaaagataaagacaaaaaacgagagctttttacaaaagcaactcaa
ctatacacaactgcagataaaattattatgttggatcaaaaccatttgcttggcagagca
tatttctgtctgttggaaggagataagatggaccaggctgatgcacagtttaatttcgtc
cttgcacagtccacaagcaacatccctgcattgttaggaaaggcatgcatctcctttcag
aaaagagattataaaagtgctcttgcgtattataaaaaggcactacgaaccaaccccaat
tgtccggctgaagtacggttgggtatgggacattgtttttatcggttaaacagactagag
aaagcaaggcttgcatttgagcggacgttagagcttaacaatagatgcacaggtgctctt
gttggtcttgctgttctggaacttaactcgaaaaagccagacagtattaaaaatggtgtc
cagttgttatcaaaagcatatagtatagacaaccaaagtccgatggttttaaatcatttg
gctaatcatttcttctttaagaaggattacacaaaagtgcaacacttagcgttgcatgca
tttcatggcacagaggtggaagcgatgcaggctgaaagttgttaccaacttgctcgttcc
tttcacgtacagggcgactacgaccaagcgtttcagtattattatcaagccacacaattt
gcttctactaactttgtgctaccatggtttggtttaggacagatgtatattgccagaggt
gataatgtaaatgcagcacagtgctttgaaaaagtgctaaaattccaacctaataattat
gaaacaatgaagattttgggatcactgtatagttcctcaatggaacctgaaaagaaagaa
atcgcaaaaaaccatttaaaaaaagttacagaacaatttcctgatgatgttgaagcctgg
attgagttagctggtatactagaacaaactgatgttcaggcagcattatcagcatatggt
gcagcttccaagatattaaaagaaaaagttgaagctgatgtaccacccgaaatattaaac
aacgttggagcattgcatttccgacttggtaatctaaaagaggccaagaaattctacgaa
gcagctttggatcattgtaaagaagaaagtatgcaagatgaagcctattacaatgccatc
tctgtttccatgcattacaacacagcaaggcttatggaagcacagtttgagtttgataaa
gcagaaaaaatatataaggatatcttaagagaacatgcaagttacgttgactgctactta
aggttgggttgcatggcccgtgataaaggccagatatacgaagcttctgactggttcaaa
atggccttacagattgaccaggaccatccagacgcttggacgttgataggtaatctccat
cttgcaaaacaagaatggggtcctggtcagaaaaaattcgaacgaatattaaagcagcct
gcaacagcaaacgacacatatgctctggttgcccttggtaacgtctggctacaaacttta
cacactccttctcgagataaaacaaaagagaaaagacatcaagaacgagcgattgctatg
tttaagcaggtgctcaggactgatccaaggaatatatatgcagctaatggaattggttgt
gttctggctcataaaggtcactatcgagaggcaagagacgtattttcacaggttcgtgaa
gccacggcagaagttgcagacatatggttaaaccttgcccatgtctacgttgaacaaagg
cagtttgtcagtgctatccaaatgtatgaaaactgcttaaagaaattctataaatcatac
agtgtagaagtgatgttttatctcgcacgtgcttactacaaagctggtcgattgtcagac
tgcaagcatttgttactcaagacacggcatgtcgctccacatgatacgctgcttatgttc
aacttgtctgttgtccagcaaagattagccactggggtgctaagaaacgaaaagagtaat
ctcaaagctgtattatccgccgtaggtgatctggaacttgcacaaagaaatttcgagtat
ttaagcaaatatggagatcgtatgaaattcgacttagcgcatgcgcgatctgaagcaggt
cgttgttcagatttactgagtcaggctcaataccatgtacagcgcgcacgaagaatagat
gaagaagaaaaggaagttaaaaagaaacaagaagaagaaagagaaatgttaagaaaaaca
aaagaagaggaggagatgaaaaaagtacaacagttggaagatgagaagaagcagttatta
gagaaacgtgctcagttcaaagaagctacgaaaggtctcttaaagttttctgcagcagaa
atggctgctaaagaaaaagctgccaaggcacgcaagaaaaaggataatttggatggacta
atagctacaagcagtgatgaagatgaactccctaagaaaaagcaagaaaggagaaagaag
aaaaacgtggaatatgatgaaaatggagaacctctacctaaaaagaaaaggcaaagaaca
aaggaaccgaaaccaaagaaggagcctaagatgtcagctaaacaacagttgaaaattaaa
tcaaaagcaacagtatcatctgatgacgattcaagttcggacgatgaacaaggtcctgtt
ataagtaaaccaagcttcaaaagaatgaaatcatcgtctagcgagagtgaggccatgcct
tctgaggcgagtgcgaaagacagcaactcggactctgataatgaaaagagttatgtaccg
aaaaaaattattagtgaaaacgaaagcgatggaagcgatgctggcgaaacatcaaaacaa
gttcctaccgacgacggaaaaaccgaagaggatgcggggccgaaaacgaagcgaaaagca
aggataataagctcctctgagtcggatggagattag
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integrated database retrieval system
