Hydractinia symbiolongicarpus: 130613893
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Entry
130613893 CDS
T09218
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130613893
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130613893
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130613893
Multi subunit type E3
LUBAC complex
130613893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
ubiquitin
zf-RING_2
IBR
Zn_ribbon_RanBP
IBR_1
zf-RING_5
zf-RING_11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130613893
NCBI-ProteinID:
XP_057291231
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All DBs
Position
11:complement(9959439..9969736)
Genome browser
AA seq
884 aa
AA seq
DB search
MAQNEFFAPINQSPFGDVVFNCVGLPTVLDSHQGSWKTFGDQKELCTIALLSPPNIILKH
ADGRFLGEIKLSASMQFHQQSVDSIIIQTNQRVYGIRLANSRDSQIFINTLSQLHEVLKR
SGESSNMQTKSTYAYQQLNQSNSPHHIQYGIPQNDSPPMMSPIQQIKPQMPQQQSVKPKQ
MPSALPTAQPTLQPQWQQLQQQLQQLPQQQQQQKTQLQQQQFNLQMQIQHQLQQQQQQQQ
YYQQQQSPSHPYTGFSPQHSPIDQYNNMIGKQPKNLLTMFNQDPFPPAGETSPNVMYQNF
ITDELKSGKDLEGDINVFKTYNSQSPPPSEEELACDVLSEAIERGNIEKAKEISSQLAKK
NCKLTVQLLNYETIEKQKDFHIIVYVEDKVDPGGAPIPVCIDPQITVGMLKYKVAKEYDF
PVAIQRWIINDRLLKDNETLVKCGVKTPGTVIYLYLLSMEDDQKRKDVQTQTKPSINGEA
MRQQTMQYNINNMSGNISPFSPFGGNPNWSPYGQNMPQLGQFGLQPQIPQVLPQNYQIFT
PPSMGVIPPLKIVKSKDPLVRKEGWECPKCTFKNPPTFPGCKMCSSNRPDDYKVPDNYQL
DPEEQERLKTEQMLEKLTLQAEFNRKAEEVKMAQRNYLQTMEHVQQKILPNPTPFDCPIC
FTNFGKGEAVMLRECLHCFCRDCLAETIKASEDPEVRCPHNDGFPCPAIITGQEIEQLLS
REDFAKFLDRSLAAAEHGTENSFHCRTPNCKGWCIYEDEVNSFLCPVCEKQNCLTCKAIH
PDKTCKQYQDELRIRAENDEAAKKTQQMLEELVTRGDAMNCPKCKIILQKKSGCDWMRCT
MCRTEICWATKGPRWGPNGPGDTSGGCKCKFNGKRCTPTCGNCH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacgagttttttgcgccaatcaaccagtcaccttttggggatgttgttttt
aattgtgtggggttgccaacagttttggattcgcaccaaggtagttggaaaacattcggt
gatcaaaaggaactatgcacaattgcattattatctcccccaaatataattctaaagcat
gcagatggaaggttcttgggtgaaataaagttatccgcttcaatgcaattccatcagcaa
tcagtagatagcattattattcaaacaaatcaacgagtgtatggtatacgacttgcgaat
agcagagattcccagatatttataaacacactatcgcaacttcatgaagtacttaagaga
agtggtgaatcatctaacatgcaaacaaaatcaacatatgcatatcagcaattaaaccag
tctaactctccccaccatattcaatatggcatacctcaaaatgatagtcctcctatgatg
tcccctattcagcaaattaagccacaaatgccacaacaacaatctgtgaaacccaaacaa
atgccatctgctctaccaacagcacaacctacactacaaccgcaatggcaacagttacaa
cagcaactgcaacaactgccacaacaacaacagcaacaaaaaacacagctacaacagcag
caatttaatttgcagatgcaaattcagcatcagttacaacaacaacaacaacaacagcag
tattatcagcaacaacaatcaccttcacacccttacacaggcttttcaccacaacattcg
cccatagatcaatataacaacatgattggaaaacaacctaaaaatctgttgacgatgttt
aatcaagatccatttccgccagctggtgaaacttcaccaaatgtaatgtatcaaaatttt
atcactgatgagttaaaaagtggaaaagatttggaaggtgatattaatgtttttaaaact
tacaactcacaatctccccctccatcagaagaagaactagcatgcgatgttctatcagag
gccatagaaagagggaatatcgaaaaggcaaaagaaatatcatctcaacttgcaaaaaaa
aattgtaaattgactgtccaattgctcaattatgaaactatagaaaaacaaaaggatttt
catattatcgtttacgtggaggataaagttgatcctggtggtgcacctattccagtatgc
attgaccctcaaataaccgtggggatgcttaaatataaggttgcaaaagaatatgatttt
cctgttgcaatacaacgttggattataaacgataggcttttaaaggataatgaaacactg
gttaagtgcggtgtcaaaacaccagggacagtcatatatttatacttactatccatggaa
gatgatcaaaaacgaaaggatgtgcaaactcaaacgaaaccttcaataaatggtgaagca
atgagacaacaaacaatgcaatataatataaataacatgtcagggaatatttcaccattc
tcgccttttggaggaaatccaaactggtcaccatatgggcagaatatgcctcagcttgga
caatttggattacaacctcaaattcctcaagtgctacctcaaaattatcaaatcttcaca
ccaccatcaatgggtgtaataccccccttaaaaattgtgaagtcaaaagaccccttagta
agaaaagaaggttgggagtgccctaagtgtacctttaaaaaccctccaacatttcctggc
tgcaaaatgtgctcaagtaatcgtcccgatgactataaagtacctgataactatcaactt
gatccagaagaacaagaacgactgaaaacggaacaaatgttagagaagctaacactgcag
gcggaattcaaccgtaaagccgaagaggtcaaaatggcgcaacgaaactaccttcaaact
atggagcatgtgcaacaaaaaatccttccaaatccaactcccttcgattgccctatttgt
tttacaaatttcggaaaaggtgaagccgtgatgctgcgggaatgtctgcattgcttttgc
agggactgtttagcggaaacaataaaagcttcagaagatcctgaagtacgttgtcctcat
aacgatggttttccttgccctgctatcatcactggtcaagaaatcgagcagttactttcg
cgcgaagactttgccaagtttttggatcgtagtttagcggccgctgagcatggtacagaa
aacagctttcactgccgaacacctaactgtaaaggttggtgtatctacgaagacgaagtc
aactcttttttatgtcctgtatgcgagaaacagaactgtctgacgtgcaaggctatccat
ccagacaaaacgtgcaagcaatatcaagatgagttgagaattagagcagaaaatgatgag
gctgctaagaaaacacaacaaatgttagaggagcttgtaacgcgaggagatgcgatgaac
tgtccgaaatgtaaaattatcttgcaaaagaaaagcggttgtgattggatgagatgtacg
atgtgtagaacggaaatctgttgggctaccaaaggaccaagatggggaccaaacggtcct
ggtgataccagcggcgggtgtaagtgtaaattcaatggcaagaggtgcacgcccacttgt
ggaaattgtcactag
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