Hydractinia symbiolongicarpus: 130613935
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Entry
130613935 CDS
T09218
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130613935
Membrane trafficking [BR:
hsy04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
130613935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
Carm_PH
LRR_4
Asp2
DUF7778
APOC4
Motif
Other DBs
NCBI-GeneID:
130613935
NCBI-ProteinID:
XP_057291287
LinkDB
All DBs
Position
11:complement(8896196..8925985)
Genome browser
AA seq
1484 aa
AA seq
DB search
MAITVEETKDDYLAAKQAIGRTDAKILFVRRCKTSKDKNDVKLLAITACRVYILTKKQQS
KIDYSFHILDINSLDCSKPINVNYFDIYLFQLNITVNVGDRQNQHVYLFASQEDSEKAVS
YLLALLKSNFININVDKQVFVKTESSQKEEVIRNQANLIVQSLAPETQPCAGFALAYMCL
CDYYNQTALAEVIWDVNKIYASHDCKDFQVEDFDHLETKEITPLIAAVGYSTWFTSFVVS
SYKLTNEVVDAIIRVIKRSPSIETITITDAHVNKEQAHRLSLALSANPNKTVKKVNLSKN
ALEDKGVTSLAGCISTLQQGIESLNLSEVALTAKGAGILASSLKNNKFMATSLTRLDLSG
NVLKSEGAQSLCDFLAQPNAVEFLNISHTESALDLLFGAMFRGCQQNLQDVCLAGNPFSY
RKSKEVQSLPAFQQFFTSSRALKFANLSNTKLPAAALKAIMVGLINNPVLTDVGLDLSHN
EIKSAGSSEISSCIKDVRCLTKLNLADNGLDQDLEQLCEAISNSHSIRELDLARNVSKSK
HNNVVSEALAEMVMSEILPLEKLSIADNKLRLDAAAIFDCVGTNETLLEINISGNAIGDV
GARLIAKALQINTKLREIILDKNNITYKGLQDLALAMNRNYSLHSIPIPMADLTASLKHT
GELFMKYYRQIEKALIRNQSTHDSTPDQAYKVHQGLLLSSIDNYTQFTDGLVVQLQDLVN
KYKNSSSEQIQKEVKTARCLIKETDSFRQVLLQLFSDPESTKKILDEKFHKISQDFHDSI
ESVLQGNLDKMLNEAQKICPSALGDEKVIKSIKQELVDGGLLDKQVVNNSLIQFGKSNLT
YKLCESNLDTGNSLAESFKKVLVEALQKSVDALSEADNKEEQAVVEKPKTESKQEESTEE
DGVTEGKIEEEFELIEKEESKEIPKETENVKEKEDLKEKEETALDDTNNKTDEDKAKVEA
KENKDSPPTSPLTPSVTITSSPIVSEMFDMPWELSAGQRISILASDLSDDDDADLAASKA
RSRLSTLTSRPDKHQRKRASVKRRPTFYRTEQDINIDTPSPRTQSGSVSTIKERPASTEV
IDAPPERVHLPSVSALDAVSASASHLKVAKDRAKPQGRRAPSRVSKLAHMNTENADSYID
AQVEVSPKTSPKPSPKPSPRQRPVSAMPASNLTAESHPVQRAASDKIKPDAPRKPDKKES
KKEKSKKPIGGIQLPSLPGFLRKGRGSSKAETADAKNGSGDVPDGKTNASTAATKPETKP
NPPVTETKPAEPKSDVEPKVEATAEETNETPDVEPPAQPKPEPVKRPAMIPKIGIPMAGG
SALLAEMKKRQNKGDGTKPPAPGPTAKPKPPSAAAKPERHGSIGAKPPPPKRPASLKKPN
GEGKPVAAERPKPALQETAEESAMESVAEESKAENSAEELVRSSSLSADANKSTEDAKKS
TEEADGDSVPMPEEPKVKEEEQKEETNENADDPGESAAAGIDFI
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaccgttgaagagactaaagatgattatttagctgctaagcaagccattggt
aggactgatgcaaagatcttattcgttcgaagatgtaagactagtaaagataagaatgac
gtaaaattattggccataacagcatgccgcgtctacatcttaacaaagaaacagcaatcc
aagattgattacagctttcacatccttgatataaactcattagattgttccaaacctatc
aatgtcaactattttgatatctatctttttcagctgaacataactgtcaatgtgggggat
cgccaaaatcaacatgtttacctcttcgcaagtcaagaagattctgaaaaagcagtttcg
tatttgcttgcactgttaaagagtaactttataaacataaatgttgacaaacaggtattt
gtgaaaacagagtcaagccagaaagaggaagtaatacgcaatcaagcaaatttaattgtc
caatctcttgctcctgaaacacaaccatgtgctggttttgcattggcctacatgtgtctg
tgtgactattataaccaaacagctcttgcagaagtgatttgggatgttaataaaatttac
gctagtcacgactgtaaggattttcaagtagaggattttgatcatcttgagaccaaggag
atcactccattgatcgctgcagttggttacagcacttggttcacaagttttgttgtatct
tcctataaactgactaatgaagtggtggatgcaatcatccgagttataaagaggtctcca
tcaattgagactatcaccataactgatgcacatgtaaataaagagcaagcacatagactt
tcactggcgctatctgctaatccaaacaagacagtgaaaaaagttaatctgtcaaaaaat
gcattggaagacaaaggtgtgaccagtttggcagggtgtatttccacattgcaacagggg
atagagtctttaaatttatccgaagttgcattaactgctaagggtgctggcatccttgct
tcttctttaaagaataataaatttatggctacatctcttacaagactggatttatcagga
aatgtgttaaaatcagaaggagcacagtcattgtgtgattttttggcacaaccaaatgca
gtggaattcttgaatatatcccatacagaatcagctcttgatcttctatttggtgcaatg
tttcgtggctgtcaacaaaacttgcaagatgtatgtttagctggtaacccattttcatac
agaaagtccaaagaagtacaatcactcccagccttccaacaattttttacctcatcccga
gcattaaaatttgcaaacttatcaaatacaaaactccctgcggcagcactcaaagctatt
atggttggtttaattaataatccagttttaacagatgttgggctagatttgtcccacaat
gagataaaatcagctggttcatctgaaattagttcatgcattaaagacgttcgatgttta
acaaaattaaatcttgctgacaatggcctagatcaagatcttgaacaattatgtgaagct
atcagtaacagtcactcaatccgagaattagatttagcacgcaatgtatcgaaatcaaaa
cacaacaatgttgtttctgaagctttggctgaaatggtgatgtcagaaatcctgccatta
gaaaaactttcgattgctgacaacaagctgcgcctggatgcagctgccatctttgattgt
gttggaacaaatgaaacacttttggaaattaatattagtggcaatgcaattggagatgtc
ggtgctagactcattgcaaaagccctacaaattaatacaaagttaagggaaatcattctg
gacaaaaataacataacatacaaaggtttacaagacttagctttagccatgaacaggaat
tattcattgcactcaatcccaatacctatggcagacttgactgcatctttgaaacatact
ggtgaattatttatgaaatactacagacagattgaaaaagcattgataagaaaccaatca
acacatgattctacacctgatcaagcttacaaagttcatcaaggactcttgttgagtagt
attgacaactatactcaatttacagatggactggttgttcaacttcaagatttagtaaac
aaatacaagaactcaagttctgaacagattcaaaaggaagtaaaaacagctagatgtctt
attaaagaaacagactcctttagacaggtgttacttcaattattttctgatcctgaatct
acaaaaaaaatacttgatgaaaagtttcacaagatttctcaagactttcatgactctata
gaaagtgttttgcagggaaacctagataaaatgttgaacgaggcacaaaaaatttgtcct
tctgctcttggcgatgagaaagtcattaaaagcatcaaacaagaactggttgatggagga
ttattggataagcaagtcgtaaataactcgcttattcaatttggtaaaagcaacctgacc
tataaactatgcgagtcaaacttggatacaggaaattcgcttgcagagagtttcaagaaa
gttttagtagaagctcttcaaaaaagtgttgatgctttgagtgaagcagacaataaagag
gaacaagcagtggtggagaaacctaaaacagaaagcaaacaagaagaaagtacagaagaa
gatggtgttactgaagggaagatagaagaagagttcgagctaattgaaaaagaggaaagt
aaagaaataccaaaagaaacagaaaatgtgaaagaaaaagaagacttaaaagaaaaagaa
gaaacggccttggacgacactaacaataaaaccgatgaagataaagcaaaggttgaagcg
aaggagaacaaagactctcctcctactagtcctttgacaccatcggttaccattacatca
tcaccaattgtatctgagatgtttgatatgccatgggagctgtctgctggccaacgcatt
tcaatattagcttcagatctaagtgacgatgacgatgcagacctggctgcaagtaaagct
cgaagtaggctgagcacattgacaagtcgtccagataaacatcaacggaaaagagcttcg
gtgaaaagaaggccaacattttacagaacagaacaggacatcaacattgacactccttcg
cctaggacgcagagtggtagtgtttctactattaaggaaagaccagcaagtactgaagtt
atagatgctccaccagaacgtgtgcacttaccaagcgtaagtgcattggatgcagtgagt
gcaagtgccagtcatctcaaagtagctaaagatcgtgccaaaccgcaaggaaggcgcgct
ccatccagggtgtcaaaattagcgcatatgaatacagaaaatgctgacagctacatcgac
gcacaagtagaagtgtctcctaagacctctccaaagccgtccccgaaaccttcaccaagg
caacgacctgtctcagctatgcctgctagcaatttaactgcggagtcacatcccgtgcag
agggctgcgtcagataaaataaaaccagatgctccaaggaaaccggacaagaaagagtct
aaaaaagaaaagtcgaaaaagccgatcggtggcatccaactaccatctcttcctggattt
ttgagaaaaggtcgtggatcttcgaaagctgaaacggcagatgcaaaaaatggatcaggg
gatgtacccgacggtaaaactaatgcgtcaacagctgccacgaaacccgagacgaaacct
aatccaccagtaaccgaaacaaaaccagcggaacccaagtcagatgtggaaccaaaggta
gaagcaacagctgaagaaacaaacgaaacgcctgacgtagaaccgccagcgcaaccaaag
ccagaaccagtaaaaaggccagccatgatacccaagattggaatccctatggcaggtggt
tcggcgttacttgctgagatgaaaaaacgacaaaataagggagatggcacaaaacctcca
gctccaggaccaacagctaaaccaaaaccacccagtgctgctgccaaaccagagcgtcat
ggttccatcggtgcgaagccgccaccgcccaagcgaccagcatcactcaaaaaacctaac
ggagaaggaaaacctgttgcggctgaacgccctaaaccagctctgcaagaaacagctgaa
gagtcagccatggagagtgtagccgaggagtctaaagctgagaattctgccgaagagcta
gtgcgaagctcaagcttatccgcggatgcgaataaatcgaccgaagatgcgaaaaaatcg
accgaagaagcagatggcgattcggtgccgatgcctgaagaaccaaaggttaaagaagag
gaacaaaaggaagaaacaaacgaaaatgctgacgatcctggggaatcggcagccgctggt
atagattttatataa
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