Hydractinia symbiolongicarpus: 130614150
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Entry
130614150 CDS
T09218
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130614150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130614150
03036 Chromosome and associated proteins [BR:
hsy03036
]
130614150
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130614150
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130614150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_BBS7
PEP5_VPS11_N
WD40_like
WD_LRWD1
WD40_MABP1-WDR62_1st
MIOS_WD40
PAN2_N
Motif
Other DBs
NCBI-GeneID:
130614150
NCBI-ProteinID:
XP_057291541
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All DBs
Position
11:7249414..7254039
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AA seq
386 aa
AA seq
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MFLYINLNDLDKINFYEEQNMAQENATFSFIGQKISKICWCARNHSSTNTNHFITGSYDD
KTNFLTYWNIPDEGVGSEPEMMNNLQVDGSVTDMVFMSPSMLLCSSSLGDVSLVAVRDLG
LNEVQKWPKLHQYEATREPSVCCCIATSNNEIITGGEDGRINLLLVDRKKPVRVLENADS
SNITGIQFLTTNEIVSVNTTGQLKLWDIRQPEIDKPQKVLTLSGNACPLLSVDKHPNQPH
ILVTGHGDGVIGIWDVRQEKAPVTLIDAHQAEVWQVKFHPLYPDNLFTCSQDGSCWFWDG
TSMISGANDIKAMNLASGRVNATLQTNDIASSSVWLYIDANKHKMETFSLLPDSKSSVNT
FDVNGSSLICGTDNEAIVIVKDIPVR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtatataaatttgaatgatttagataaaataaacttttacgaggagcagaac
atggctcaagaaaatgctacctttagttttattggtcaaaagatatcaaaaatatgttgg
tgtgcacgcaatcatagttcgacaaacacgaaccatttcataactggtagttacgatgac
aaaacaaactttttgacatattggaatatcccagatgaaggagttggctctgaaccagaa
atgatgaataatcttcaagttgatggttcagttacagatatggtctttatgagcccaagc
atgttattgtgtagctcaagtttaggagatgtttcgttagttgctgtacgcgaccttgga
ttgaacgaggtgcaaaaatggccaaaactacatcagtatgaagcaactagagaaccgtcg
gtttgttgttgcatagcaacaagcaacaacgagattatcacaggcggtgaagacggcagg
attaacctgttgcttgtcgaccgcaagaagcccgtgcgtgtactagagaatgcagatagt
tcgaacatcactggcattcaatttctaacaacaaatgaaatcgtttccgtcaacactacg
ggacaattaaagttatgggatatacgccaacctgaaatagataaaccgcagaaagttttg
actttatctggtaacgcttgtcccttgttatcggttgacaaacaccccaatcaaccgcat
atattagtgaccggtcacggcgatggcgttatcggtatatgggatgtaaggcaggaaaaa
gcgccggttactttaatagacgctcaccaagcggaagtatggcaagttaaatttcatcca
ttgtacccggacaatttgtttacttgttcacaggacggttcgtgctggttttgggacggc
acctcaatgatatccggtgcaaatgacataaaagcgatgaatctagcatccggacgcgta
aatgcaaccttacaaacaaatgacatagcctcttcgagcgtttggctatatatcgacgca
aacaagcataaaatggaaactttctctttactgccggacagtaaaagttcggtgaataca
tttgatgtaaacggttcgtcgttaatttgcggaacagataacgaagcgattgttattgta
aaagatattccagtccgctag
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