Hydractinia symbiolongicarpus: 130614194
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Entry
130614194 CDS
T09218
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130614194
Spliceosome [BR:
hsy03041
]
Common components
Common spliceosomal components
General mRNP proteins
130614194
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
130614194
NCBI-ProteinID:
XP_057291593
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All DBs
Position
11:9723272..9738705
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AA seq
536 aa
AA seq
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MTRDDDFDVDDLLEAPYKKQEENGNASSASDEVDTIIKKKKSSRKNRSRSRSVSKERKKR
RSRSRSGSREKRRRSRSRSASKERRRRSRSKDKRRRSRRSRSRSASRDRRRRHSRSRSTS
RDRRRRRSVSPVRRRRSSPDRSQEVKSDGLGKATTNDRVRRSLDGVTTISLRTDREREME
DDSITQEERDARTVFIMQLARNVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEF
TDPSAVTLAIKLSGQRLLGVPIMVSPTMAEKNRFAAAQAALVKPQGPMKLYVGSLHYNIT
EPMLRAIFEPFGVVESVQLQYDTETNHSKGFGFVNFRDAAAAKRAMEQMNGFELAGRPMK
VNTVSERMDGSMSFLDDEETEKGGIEMNAQSRASLMQKLAQTHGAGMHVPTAPVVPAMLA
SPLTPMGGSTCLVLSNLFDPRKETDQDWEQDYRNDVLEEVTKQGIVVHISVDKVSPEGNV
YLKCLTTDVAGKIIQSFNGRWFAGRTIRAVPIPVTNYHTMFPTAASAVRPLKPDPS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagatgatgactttgatgttgatgaccttctagaggctccatacaaaaaacaa
gaagaaaatggaaatgcatcaagtgccagtgatgaagtcgataccatcataaagaaaaag
aaaagttctagaaaaaaccgatcacggtcaaggtcagtatcaaaggaaagaaaaaagaga
cgtagccgtagtagatctggatctagagaaaagcgcagacgtagccgcagcaggtctgct
tcaaaggaaagacgcagacgctcaaggtcaaaagacaaaagaagaagaagtagacgtagt
cgtagcagatctgcatcaagagacaggagacgaaggcatagtcgcagtcgatctacctca
agggatagaaggagaagaaggagcgtcagtcctgttagaaggagacgatcttcacctgat
cgcagccaggaagtgaaatctgatggtcttggcaaagcaactacgaatgatagggtacgt
cgtagcttggatggagtgaccacaatatcactaagaacagatcgtgagcgtgaaatggag
gatgatagtataacccaagaagagagggatgctcgtactgtattcattatgcagttggcc
cgtaatgtcacgatacgtgatattcaggacttcttcagtaaagttggacaagttcgtgat
gttcgattaatttctgatcgtaactcaaggagatctaaaggaattggttatgtagagttt
actgatccaagtgctgtaacattggcaataaagctatcaggtcaacgtctccttggtgta
ccaatcatggtttcgcctaccatggcagagaaaaatcgttttgcggctgcacaggcagca
ttggtcaaaccacaaggacctatgaagctatatgttgggtctttgcattataacattact
gaaccaatgctgagagctatattcgaaccattcggtgtagttgaaagtgtacaactgcag
tacgatactgaaactaaccattccaaaggatttggttttgtgaattttcgagatgctgct
gcagccaagagagcaatggaacaaatgaatgggtttgagttagctggccgtcctatgaaa
gtgaatactgtttctgaacgtatggatggttccatgtcctttttagatgatgaagaaact
gaaaaaggtggcattgaaatgaatgcgcaatcaagagcatcactaatgcaaaaattggca
caaacccatggggcaggaatgcatgtgccaactgctccagtagttccagcaatgttagcg
tctcctcttacgcccatgggtggaagtacatgtcttgtattgtcaaatctgtttgaccca
aggaaagaaacagatcaagactgggaacaagactatcgaaacgatgtacttgaggaagtt
acgaaacaaggaatagtcgtgcatatatcggtcgacaaagtcagtccagaaggaaatgtt
tacctgaaatgtttaacaacagacgtggcaggaaaaataattcagtcttttaatggtcgc
tggtttgcaggtcggactattcgtgctgttcctataccagttacgaattatcatacaatg
ttccctaccgcagcaagcgccgtacgaccgcttaagccggatccaagttaa
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