Hydractinia symbiolongicarpus: 130614360
Help
Entry
130614360 CDS
T09218
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130614360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130614360
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130614360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
MecA
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
130614360
NCBI-ProteinID:
XP_057291769
LinkDB
All DBs
Position
11:complement(10757937..10790580)
Genome browser
AA seq
1123 aa
AA seq
DB search
MKRKIDASAAVKIKKKKKENKILTAEERQRRKTSLYRAPTCEEINELKENENLYKNNLFR
MQIQYLLEEVTLNEEKTKKLNNVLHSLNEFLKSIPSSPKECEVSGSCLPTDVKFPIPDTI
PRSKIKGKFQFIAPQEIKVVGSYLLKTLTKPNQFVDIAVEMPKECLQAKDYLNYRYHFKR
ACYLSWLASALKKWEHNAALTFSSDEDIYKPIIKIKLKGKIGKKYSIRLLISVPEDIFKL
SRFNPLQNNVRSNWYDNLDSEATEELEYPTPHYNASVLSDMLYETHLHTLYNAVKECPGI
KDAICLFKVWLKQRTFKGVCTFNGFIGSMLMVYLLQVRKISSHMSSYQIFRIVLHFLGTS
DWIKNGISLCTDENNKCKVGDFHALTDVVFVDASGFFNLCFNVNKVTYEMIKYQAQLSLD
ILDNSMIDGFNALFIKYYSFMQSVDHSFRLSHLNSFKEKLLNEETYKSKIVDFGGDWSLL
LAEMVVPVLQKGLGKRINRITMKPSNCCEWTVTTNPPGFSNRNFEFGIYLNNEFSDNIID
MGPPADQPEAKEFRDFWGAKSELRRFQDGSINEAVIWPCVNIEEKKLICRRIVEHLLKLH
CNITSLSINYHGDEFNCLLKPKYVVEEMKSKVKPGCGEEEFVNFIKTYDALCKQIRNLDE
LPLRINSIHAIDPAFRMTAVVPPSQFKTRPDIQRKFLLPRSGKKCPTWCPVYNTLIQFET
SGKWPDDIEAIHHIKAAFHIKIASCLKRVGIPAVSTPTFVDVTKNGYVFRLSVVHYREMV
LCTESSATGLLKKQHEITSKELDLLIVKKPVHNTLIHSLNGQHNAYALTTRLSKRWIASQ
MLSDYLCDEAIELIVASLFLSPAPLEAPSSHYNGFLRFLNFLTKFDWQNEPLIVNLNDQL
TIEDVGEIQERFSATRSQIPSAVIATPYDKEMSVWTKTNPSKQILRRVSLLADAALKLTE
ADNYNWCEDTVKQMFRPSLEDYHYIIELNKEFVPLYSQAIDSSILIKPTAVKNTIINSCI
PVVDFDPVKLYLNELREAFSEVAMFFYDAYGGTKVGVVWKPSANTPQPFKILHAQYKMLV
KKKKSRKKDVLSNTDTMVANIPAILSDFKVIGKGLVDAVKENS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaaattgatgcaagtgctgctgtgaaaattaaaaagaagaaaaaagaaaat
aagatattaacagctgaagaaaggcagcgccgaaagacatcattgtatagagcccctaca
tgtgaggagataaacgagttgaaagaaaatgaaaatttatataaaaataatctttttcga
atgcagattcagtatttattagaagaagttaccctgaacgaagaaaaaacaaaaaagctt
aacaacgtgttgcactcattgaatgaattcttaaaatctattccatcttctccaaaagaa
tgtgaagtatctggcagttgtcttcctactgatgttaaatttccaattcctgatacaata
cctcgttcaaaaattaaaggcaaatttcaatttattgctccgcaagaaattaaagttgtt
ggtagttacttgttgaaaactttgacaaaaccaaatcaattcgttgacatagcagttgaa
atgccaaaggaatgcctgcaagcaaaagattacctgaattataggtatcacttcaagagg
gcttgttatttgtcttggttagcaagtgcactaaaaaaatgggagcataatgcagcttta
acgttttcatctgatgaagatatctacaaaccaataattaaaattaaattaaaaggaaaa
attggcaagaagtactccatcaggttactcatcagtgtaccagaggacatatttaaattg
agtcgatttaatccgttgcaaaacaatgttcgatctaactggtatgataacctggacagt
gaagccacagaagaattagagtacccaacacctcattacaatgccagcgttctatctgat
atgctttatgaaacacatttacacacattatacaatgctgttaaagaatgtcctggtatc
aaagacgcaatttgtctatttaaagtttggttaaagcagagaacgtttaagggtgtttgt
acttttaatggttttattggttcaatgttgatggtgtatttactccaagtgagaaaaata
tcttcacatatgagctcatatcaaatcttcaggatagtactccacttcttaggaacttca
gattggattaaaaatggaataagtttgtgtactgatgagaataacaagtgtaaagttgga
gacttccatgcattaacagatgttgtatttgtggatgcatcaggtttttttaatctctgt
tttaatgtgaacaaagtgacttatgaaatgattaagtatcaagcacaactctcattggat
atcttagataactctatgattgatggatttaacgctttgtttattaaatactattctttt
atgcaatctgtcgaccactctttcaggttgtcgcatttaaactcattcaaggaaaaactc
ctaaatgaagagacctacaagagtaagatcgttgacttcggtggtgattggtcgctcttg
cttgctgaaatggtggtgcctgtactgcagaaaggtttgggtaaaagaataaatcgtatc
accatgaaaccttcaaactgctgtgagtggacagtaactacgaacccccctggattttcc
aaccgaaatttcgaatttggaatttatttaaacaatgaattttccgacaacataatagat
atgggtcctccagctgatcaaccagaggcgaaagaatttcgagatttttggggcgctaaa
tcagagttacgtcgatttcaagatggtagcatcaacgaagctgttatatggccgtgtgta
aacattgaggagaagaaattgatttgcagaagaatagttgaacatttacttaaactgcat
tgcaacattacgtcattatcgataaattaccatggtgatgagtttaattgtctgcttaag
cccaagtatgttgttgaagaaatgaaatcgaaagtgaagcctggttgcggcgaagaggag
tttgtcaactttataaaaacgtatgacgcgctatgtaaacaaataagaaatcttgatgag
ctgccgttgcgaataaattctatacatgcaattgatccagctttcagaatgacagcggtg
gtccctccgtcacagtttaaaacaagacctgacatccaacgaaaatttctgttaccaaga
agtgggaaaaaatgtccaacctggtgcccagtttacaatactttgattcagtttgagaca
agtggaaaatggcctgatgacatcgaggctatccatcacatcaaagcagcgtttcatata
aagattgcaagctgcttaaagcgtgtcggtatacctgcagtatctacaccaacctttgtt
gacgttaccaaaaatggttacgtgtttcgcctctcggttgtccattatcgtgaaatggtt
ctatgtacagaaagctctgctacaggattacttaaaaaacaacatgaaataacaagcaag
gagctcgacttgctgatcgtcaagaaacctgtacataacactttaatacacagtttaaat
ggccaacataacgcgtacgccttaacaacacgtcttagcaaacgttggatcgcatcgcag
atgctttctgattacttgtgtgatgaggctatcgagttgatagtggcctcgctgtttcta
tctccggctcctctggaagcacccagttcgcactacaatggattcttgcgctttttaaat
ttcttaacgaaatttgattggcagaatgaacctttaattgtcaacttaaatgatcaactg
acaattgaggatgttggagagatacaagaaaggtttagtgcgactcgctctcaaattcct
tctgctgtcatagcaacgccatacgataaagaaatgtcggtgtggacaaaaacaaatcca
tcaaaacagattctacgtcgtgtaagtttattggctgacgctgcgttgaaactaacggaa
gccgacaattacaactggtgtgaagacactgtaaagcaaatgtttcgcccttcattggaa
gactaccattatattattgaattaaacaaagagtttgttccactttactcgcaagcaatt
gacagtagcattctaatcaaaccaactgctgttaaaaatacaattattaacagttgtata
cccgtggtcgattttgatcctgtaaaattgtacttgaatgaacttcgtgaggcattctct
gaagtggcaatgtttttttacgacgcgtatggaggtacaaaagtgggtgtggtatggaaa
ccctctgctaacactcctcaaccatttaagatactgcatgctcaatataaaatgttggtg
aaaaaaaagaaatctcgcaagaaggatgttctttcaaacactgataccatggttgccaat
atacctgccattttatccgacttcaaagtgattggaaaaggtttagttgacgctgtgaaa
gaaaactcatga
DBGET
integrated database retrieval system
