Hydractinia symbiolongicarpus: 130614413
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Entry
130614413 CDS
T09218
Name
(RefSeq) glycine receptor subunit alpha-3-like
KO
K05195
glycine receptor alpha-3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04080
Neuroactive ligand-receptor interaction
hsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130614413
04082 Neuroactive ligand signaling
130614413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130614413
Ion channels [BR:
hsy04040
]
Ligand-gated channels
Glycine
130614413
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
OSTbeta
Motif
Other DBs
NCBI-GeneID:
130614413
NCBI-ProteinID:
XP_057291821
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All DBs
Position
11:complement(21865758..21873603)
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AA seq
419 aa
AA seq
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MCAVSMSWLQVFVSWISVTLVSSSVLDFIDKQIKTGKYDKRLRPYSGGPSLSVKHQLYII
SLGPIETTTFTFETEFYLRQWWTDPRIIFNASKTQLNSKIQPESIIWIPDLTIINARKVE
FYHSAVRTVLKGDGTVYISQRLKAKCNCLMDLTYYPMDTQKCQITFESFAYSRSDMILSW
HKTPVITDHIHTPAFSIESVEGTIKTMEFDIDNRKEIYDNLIVTFKVKRTFLYFVYRVYV
PTILLMIFNFGSYWIPATAVPARVTLIVTTFLASTFILQSVSGETVKVSYTTPLQLFMLV
SVVLVVVAIVEYMVVLFIKERHKKLRKKSEIETNAGYVEQKKSKTNKHVVQNVNAIVSGY
PSQHAVTNGYRQKTVAPKTIQVMPKSTLSFKIDIVFRTVLPFFYVIFCCSYFTYYLIVV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgtctcgatgtcttggttgcaagtattcgtctcctggatatcagttacactg
gtatctagtagcgtgttggacttcattgataagcaaataaaaacaggaaaatacgataaa
cgactgcggccatatagcggtggaccatctctctctgtgaagcatcaactatatattata
tccctgggaccgattgaaacgacaacctttacgtttgagactgagttttatttgcgtcaa
tggtggacagatccaaggataatcttcaatgcttcgaagacgcaacttaacagtaaaatc
caaccagagtccatcatatggataccagacctaacaattattaatgcgagaaaagtggaa
ttttatcattcagcagttcgcacagtcttgaaaggtgatgggactgtgtatattagtcaa
agactaaaagcgaagtgcaactgtttgatggatcttacttattacccgatggacactcag
aaatgtcaaataacgtttgaaagttttgcgtattcaagaagtgatatgatattgagttgg
cacaaaactccagtaataacagatcatattcatacacctgctttttctatcgaatctgtt
gaaggcacgattaagacaatggaatttgacattgataatcgcaaggaaatttacgacaac
ttgattgttaccttcaaagtaaagagaacgtttttgtatttcgtctatcgtgtttacgtt
cccaccatcctgcttatgatcttcaacttcggctcgtattggattcctgcaacagctgta
ccagcacgagtgacattaattgtaaccaccttcttagctagtactttcattctgcaaagt
gtcagtggcgagacggtgaaagtatcttataccacacctttgcagttatttatgttagta
agtgtggtcctggttgtggtggctattgttgagtatatggtggttttgtttatcaaggaa
cgacataagaaattgcgtaaaaaaagtgagattgaaactaatgctggttatgtggaacag
aaaaaaagcaaaacgaacaaacacgtggtacaaaatgtgaacgcaattgttagtggatat
ccctctcaacatgcggtaaccaatggatatcgtcagaaaaccgtggcgccaaaaacgatt
caagtaatgcctaaatcgacactctcttttaaaattgacatcgtgtttcgaacggtattg
ccgtttttttacgttatattttgttgttcatatttcacttattatttaattgttgtttga
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