Hydractinia symbiolongicarpus: 130614545
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Entry
130614545 CDS
T09218
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130614545
04121 Ubiquitin system [BR:
hsy04121
]
130614545
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130614545
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130614545
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130614545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
zf-RING_5
zf-B_box_Trim66
Invasin_D3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
VPS18_RING_C
CopC
TPR_MLP1_2
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
130614545
NCBI-ProteinID:
XP_057291953
LinkDB
All DBs
Position
11:complement(24029848..24038301)
Genome browser
AA seq
878 aa
AA seq
DB search
MASFNPTSSSNEYTRCKNCGSQVLNVELKILPCLHSFCASCLQRRVLRSLTGELSLSCPT
CNRDVKLSEDGGVAALPSSSLIQDYFVDVVVSHSGDPLDTQSKPQPLSTMSSSMLSWINK
NTQETHSFSRSSQPNFGFGSGGNSIECTACDEGENASYICRHCNEYLCDHCAMAHQRVRL
TKVHEIIKLRGDQIRDIFSSQTQSPVLKHRQDVPKTGFSSLGSPVSSLSFSSFNLGTSIT
QPLRDALPSYETTAPLQTPASSLKSTPLSLAPSTTQTSKSRLFCELHAREHTLFCNFCLQ
PVCRDCVNNNHKGHSINFLTSPNVDTSPIGSNNEVALRKIVTDSRVEIKAMEDAVSSVEN
MIDSVERKSQAVVNDVQATVKKHMVALEERERELLHRVEKIRQVKSKSLHIQLEHLKLSI
SKLKIAADSSEIALDRGMDITDSRDNVMDTLQSIRSRRYMFQPYEEDLILFTPPDSALQT
ALNSMGIISSSAFPPLCTAIGEGLRRGIKGKVSMFTVIAKDHQGANRCIGGDNVHVVIDG
PDGRQLTGEIYDRQNGNYTVTYRPVSEGGHIVRVTIRGQPIMDSPFSLTVKSGRNYNNIG
QPYFQFGAEGEDGGQLCRPWGVCCDRDGNIIVADRSNNRIQVFDCKGNFLRKFGTAGSRN
GQFDRPAGVCVDSQNRVIVADKDNHRVQIFKIDGTFILKFGERGSKNGQFTYPWDTACNS
QEQILVSDTRNHRVQLFSAEGVFLNKYGFDGPLWKHFDSPRGVAFNHEGHIVVTDFNNHR
LLVIHQDFQTARFLGTEGGNNGQFLRPQGVAIDHEGNIIVADSRNHRIQIFQPNGNFLCK
FGLYGSGIGQLDRPSGLCVTPEGMILIVDFGNNRIQAF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcaatcccacatcaagtagtaatgaatacactcgatgtaagaattgtggt
tcacaagttctgaacgtcgagttaaagatactaccgtgtttgcattcattctgtgcgagc
tgtttacaacgccgtgttctacgatctttgaccggagagcttagtttatcttgtccgact
tgcaatcgagacgtaaagttgagtgaagatggcggcgtagcagcgctgccttcaagctct
ctaattcaagattatttcgtggatgttgtcgtttctcatagtggtgatccattagacaca
cagtcaaagccacaacctttatcaacaatgtcaagttcaatgttgtcatggataaataaa
aacacgcaagaaacacattctttttcacgctcctcacaaccaaattttggcttcggaagt
ggaggaaattcaatcgaatgtactgcctgtgacgagggtgaaaacgccagttatatatgt
cgtcattgtaatgaatatttatgtgatcactgtgctatggcacatcagagagtacgttta
acaaaagttcatgaaattatcaagctacgaggagatcaaatccgtgatatttttagttca
caaacgcaaagtcctgtattaaagcatcgacaagatgtaccaaaaactggtttttcttca
cttgggtcaccagtaagctccttgtctttcagttcatttaacctggggactagtattaca
caacctcttcgagatgctctaccatcttatgagaccacagcacctttacagactccagct
tcatctttaaagtctaccccactttcattggcaccatctacaacacagacatcaaaatct
cgattattttgtgagctacatgcaagggaacatactttattttgcaatttctgtttacaa
ccagtgtgtagagactgtgtaaacaataatcacaaaggacattcaattaattttctcact
tctcctaatgttgatacatcaccaattggtagcaacaatgaagtagcactgcgtaaaata
gtcacagattcccgtgtagagattaaggccatggaggatgctgttagtagtgttgaaaat
atgattgatagtgttgaaagaaagagtcaggctgttgtcaacgatgtacaggctactgtc
aagaaacatatggttgctttagaggaaagggaacgagaactgttacatagggtagagaaa
attcgacaagttaaaagtaaatcattgcatatacaacttgaacatcttaaattatcaata
agtaaattaaaaatagctgctgattcatcagaaattgcacttgataggggtatggatata
actgattcaagggacaatgttatggacacacttcaaagcattagatctcgccgttacatg
tttcaaccttatgaagaggatttgatactgtttacacctcctgactctgcactacaaaca
gcactgaactcaatgggtattatcagtagcagtgcattccctccactttgcactgcaata
ggtgaaggtttacgacgtggtataaaagggaaggtatccatgtttacagtaattgcaaaa
gaccaccaaggtgctaatcgatgtattggtggtgataatgtccatgttgttattgacggt
ccagatggtcgtcaacttactggtgaaatttatgatcgtcaaaatggcaattatactgtt
acttatcgtcctgtttcagagggtgggcatattgtaagagtgaccataagaggacaacca
attatggattctcctttttcattaactgtaaagagtggccgcaactataacaacattggc
cagccttactttcagtttggtgctgagggagaagatggtgggcagttgtgtcgtccatgg
ggagtatgttgtgacagagatggcaatattattgttgcagatcggagtaataaccgtata
caggtttttgattgtaaaggaaattttcttcgcaaatttggtactgcagggtcaagaaat
ggtcagtttgatcgaccagccggagtgtgtgttgacagtcaaaatcgagttattgttgca
gataaagataatcacagagttcaaatttttaagatagatgggacttttattttaaagttt
ggagaaagagggagcaagaatggacagtttacttatccttgggatactgcatgtaacagt
caggaacaaatccttgtatctgatacaagaaatcacagagtgcaattgttttctgcagag
ggtgtatttcttaacaagtatggttttgatggaccactgtggaaacattttgactcaccc
aggggagtagcatttaatcatgaaggtcatattgttgtgacggattttaataaccaccgt
ttattagttattcatcaagattttcaaacagcaagattccttggcacagaaggtggtaat
aatggccaatttttgcgacctcaaggtgtggctatagatcatgaaggaaatatcattgtt
gcagattcaaggaatcatcgtattcaaattttccagccaaatggtaattttctgtgtaag
tttggattatatggtagtggaattggtcaattggatcgaccatctgggttatgtgtcaca
ccagagggaatgattttaatagttgattttggtaataatcgaatacaagcattttaa
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