Hydractinia symbiolongicarpus: 130614552
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Entry
130614552 CDS
T09218
Name
(RefSeq) short transient receptor potential channel 4-associated protein-like
KO
K11796
Trpc4-associated protein
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsy01009
]
130614552
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130614552
Protein phosphatases and associated proteins [BR:
hsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130614552
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
130614552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
130614552
NCBI-ProteinID:
XP_057291959
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All DBs
Position
11:8718525..8736274
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AA seq
789 aa
AA seq
DB search
MSDLYLKTRSINQNICKQFFNAQNTGRRIKHHGVPSALNKSERYGVEDYLRKSHTGVWDL
IETLDKLYFLKKFDTLPVLESLEKLHKLFTEDDANFHMVTNAKTARNMTVPDIFYMNGGT
KVILRVLFHPVVNGKADTLSISNEAQRKIRVYCFEILRSVCLAVENVALMVGKFDHLIEF
LFSCMEDRKTFLAASTLLEELLASNRKIVDLSQIKNLQSLTVNLRESNFPGFCRILSTAV
ADIDFSEQRCTLLAQDKEEHDRSHEKSLADLNQGLLLSYPEFLSRMVKLASKPFPGGSLI
SQIPPALQSLVLNVPIPMENIHEILDGDDPPPISSLFSLNNQSNASSHPSSSNNSQTFEH
PTWLPLPVQVMNEVMHKVEILYVLTLFLCGKYKYDVQAKLSDLKFIPMLCDMFDKLYWNT
ESNRFPRHNHHEDEDCDCTPESALKIQFLRFVHSFCDHNDKRYLLLCSREIQEMRDLCDK
YGTQRPVSLDKSRSKYRCSGQKGLITKIIDVLKKTAANNALRFWLSRAIEGFLRGSVSPP
DQHFLINRGLIKHLYEHIVTSDTKAKEIIQSSFDLLGELMKFNVAGFVQFNQSVESGAQF
EKFLSVMTSSVVDSNMFIRCIVLSHERFSSTGVYNTQQCHLSGIIKKWEHKIYLMYKLIT
SISVDSLTQENVSCLNTTLIFLMFAYNHGQLDKYLQAFLTEEEAQKHPGLILSNLRELLL
FWKTHYLNREKDCAQLQQSSSITFEKWQSVVDVMLSEDISKQTSILCYLTPKHTNSIHFR
TVDYLSRDA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttgtatctcaaaacgcgaagcatcaatcagaacatttgtaaacaatttttt
aatgctcaaaacactggtagaagaattaaacatcatggagttccatctgcacttaacaag
agtgaacggtacggtgtggaagattatttgagaaaaagtcatactggtgtttgggattta
atcgaaactctagataaattgtatttcttaaagaaatttgatacattgccagtgttggaa
tctttagagaagttacataagttatttacagaagacgatgctaactttcacatggtcacc
aatgcaaagactgcacgtaacatgacagtaccagacattttttacatgaacggtggcact
aaagttatactaagagtcttatttcatcctgtagtaaatggaaaagcagacacattgtca
atatcaaatgaagcacaacgaaagattcgagtttattgttttgaaatattgcgcagtgtt
tgcttagcggttgagaatgttgctttgatggttggtaaatttgatcatttaattgaattt
ttattttcatgcatggaagatagaaaaacttttttggctgcttctactttattggaggaa
ttattggcatcaaatcgtaaaattgtagacctgtctcagataaaaaatcttcaaagtctc
actgtaaatttaagagagtcaaatttccctggtttttgtcgtattttatcaactgcagtg
gctgatatcgatttttcggaacagagatgtacattattggcacaagacaaagaagaacat
gatagatcacatgaaaaatcacttgcagatttaaatcaaggcctgctattgagttatcca
gaatttctgagcagaatggttaaattagccagcaagccattccccggtggctctttaatc
agtcaaataccacctgctttgcaaagtctggttttaaatgttccaataccaatggagaat
attcacgaaatactggatggcgatgacccacctccaatttctagcttattttctttaaat
aaccaaagcaatgctagtagccacccatcttcatctaataattctcaaacatttgaacat
cctacatggcttcctcttcctgtgcaggttatgaatgaggtgatgcataaagtagagatc
ttgtatgttttgacattatttctttgtggaaaatataaatatgatgttcaagcgaagctg
agtgatttaaaatttattccaatgttgtgtgatatgtttgataaattatactggaataca
gaaagcaatcgatttcctcgacacaatcatcatgaagacgaagattgtgactgcacaccg
gaaagtgctttgaaaattcagtttttaagatttgttcacagtttctgcgatcacaacgat
aaaagatatttacttctttgctctcgtgaaattcaagaaatgagagacttatgtgacaaa
tatggtacacaaagaccagtttcattagataaatcacgaagtaaatacagatgcagtggt
caaaaaggtctcatcactaaaataattgatgtgttaaaaaaaactgcagcaaataatgct
ttaagattctggttgtcaagagcaattgaaggttttctgagaggttctgtatctccacca
gatcaacatttcttaattaataggggtctcattaagcatctttacgaacatattgtaacc
agtgatactaaagcaaaagagattattcaaagtagttttgatttgcttggtgaattaatg
aagtttaacgtagctggattcgtacaattcaatcagtcagtagaatcaggggcacagttc
gaaaagtttttatcggttatgacgtcaagtgtggtggactcgaatatgtttattcgttgt
attgtgttgtcccacgagaggttctcctccactggagtatataacacacaacagtgtcac
ctcagtggaataatcaaaaaatgggaacataaaatatatttaatgtacaagctaataacc
tcaatctcagttgacagtctaacacaggaaaatgttagctgtttaaacactactctaata
tttttaatgtttgcgtataatcatggtcagcttgataaatacctacaagcctttctgact
gaagaagaagcacaaaaacatcctgggttaattctgtcaaatttaagagagttgttatta
ttttggaaaacacattacctgaatcgtgaaaaagactgtgctcaacttcaacaaagttca
tcaataacatttgagaaatggcagagtgttgttgatgttatgctaagtgaagacatttcc
aaacaaacatcaatattgtgttatctgacaccaaagcatacgaacagtatacattttagg
actgtcgattatctatctagggatgcataa
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